RTCGAToolbox: a new tool for exporting TCGA Firehose data (Q30847189)

8 November 2017

RTCGAToolbox: a new tool for exporting TCGA Firehose data (English)

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8 November 2017

Mehmet Kemal Samur

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8 November 2017

language of work or name

English

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publication date

2 September 2014

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8 November 2017

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8 November 2017

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8 November 2017

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8 November 2017

e106397

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Creative Commons Attribution 4.0 International

8 November 2017

start time

2 September 2014

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April 2022 Public Data File from Crossref

copyrighted

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describes a project that uses

GEOquery

object named as

GEOquery

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

limma

object named as

limma

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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The shaping and functional consequences of the dosage effect landscape in multiple myeloma

14 July 2018

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Exploring TCGA Pan-Cancer data at the UCSC Cancer Genomics Browser

14 July 2018

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14 July 2018

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Enabling transparent and collaborative computational analysis of 12 tumor types within The Cancer Genome Atlas

14 July 2018

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The Cancer Genome Atlas Pan-Cancer analysis project

14 July 2018

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Large scale comparison of gene expression levels by microarrays and RNAseq using TCGA data

14 July 2018

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Signatures of mutational processes in human cancer

14 July 2018

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14 July 2018

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A self-updating road map of The Cancer Genome Atlas

14 July 2018

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Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal

14 July 2018

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Nozzle: a report generation toolkit for data analysis pipelines

14 July 2018

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canEvolve: a web portal for integrative oncogenomics

14 July 2018

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14 July 2018

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14 July 2018

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GISTIC2.0 facilitates sensitive and confident localization of the targets of focal somatic copy-number alteration in human cancers

14 July 2018

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Online resources of cancer data: barriers, benefits and lessons

14 July 2018

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Circos: an information aesthetic for comparative genomics

14 July 2018

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An infrastructure for interconnecting research institutions

14 July 2018

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BioMart Central Portal--unified access to biological data

14 July 2018

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Comprehensive genomic characterization defines human glioblastoma genes and core pathways

14 July 2018

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GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor

14 July 2018

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BioDownloader: bioinformatics downloads and updates in a few clicks

14 July 2018

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Oncomine 3.0: genes, pathways, and networks in a collection of 18,000 cancer gene expression profiles

14 July 2018

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caGrid: design and implementation of the core architecture of the cancer biomedical informatics grid

14 July 2018

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

14 July 2018

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Human genome 10th anniversary. Will computers crash genomics?

14 July 2018

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Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0106397

10.1371/JOURNAL.PONE.0106397

21 January 2018

Identifiers

DOI

1 reference

8 November 2017

0 references

1 reference

8 November 2017

PubMed publication ID

25181531

1 reference