Metaproteomics reveals differential modes of metabolic coupling among ubiquitous oxygen minimum zone microbes (Q30838097)

14 October 2017

Metaproteomics reveals differential modes of metabolic coupling among ubiquitous oxygen minimum zone microbes (English)

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14 October 2017

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Steven J Hallam

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14 October 2017

Ljiljana Paša-Tolić

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14 October 2017

Angela D Norbeck

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14 October 2017

Alyse K Hawley

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14 October 2017

Heather M Brewer

series ordinal

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14 October 2017

language of work or name

English

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publication date

22 July 2014

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Proceedings of the National Academy of Sciences of the United States of America

14 October 2017

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14 October 2017

111

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14 October 2017

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14 October 2017

11395-11400

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Facets of diazotrophy in the oxygen minimum zone waters off Peru

14 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Gene-centric approach to integrating environmental genomics and biogeochemical models.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Molecular tools for investigating microbial community structure and function in oxygen-deficient marine waters

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Giant hydrogen sulfide plume in the oxygen minimum zone off Peru supports chemolithoautotrophy

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Insights into the phylogeny and coding potential of microbial dark matter

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Sulfur oxidizers dominate carbon fixation at a biogeochemical hot spot in the dark ocean

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Nitrite oxidation in the upper water column and oxygen minimum zone of the eastern tropical North Pacific Ocean

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Active nitrogen-fixing heterotrophic bacteria at and below the chemocline of the central Baltic Sea

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

The Genome of Nitrospina gracilis Illuminates the Metabolism and Evolution of the Major Marine Nitrite Oxidizer

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Evidence for hydrogen oxidation and metabolic plasticity in widespread deep-sea sulfur-oxidizing bacteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Diversity and population structure of Marine Group A bacteria in the Northeast subarctic Pacific Ocean

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Microbial oceanography of anoxic oxygen minimum zones

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Microbial community structure across fluid gradients in the Juan de Fuca Ridge hydrothermal system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Microbial ecology of expanding oxygen minimum zones

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Nitrite oxidation in the Namibian oxygen minimum zone

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

One carbon metabolism in SAR11 pelagic marine bacteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Nitrogen fixation in denitrified marine waters.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Microbial nitrogen cycling processes in oxygen minimum zones.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Beyond the Calvin cycle: autotrophic carbon fixation in the ocean

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Microbial metatranscriptomics in a permanent marine oxygen minimum zone.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Ocean Deoxygenation in a Warming World

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Microbial community dynamics in a seasonally anoxic fjord: Saanich Inlet, British Columbia

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Denitrification as the dominant nitrogen loss process in the Arabian Sea.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Revising the nitrogen cycle in the Peruvian oxygen minimum zone

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Detoxification of sulphidic African shelf waters by blooming chemolithotrophs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

13C-isotope analyses reveal that chemolithoautotrophic Gamma- and Epsilonproteobacteria feed a microbial food web in a pelagic redoxcline of the central Baltic Sea.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Linking crenarchaeal and bacterial nitrification to anammox in the Black Sea

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Spatial coupling of nitrogen inputs and losses in the ocean

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Deciphering the evolution and metabolism of an anammox bacterium from a community genome

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Pathways of carbon assimilation and ammonia oxidation suggested by environmental genomic analyses of marine Crenarchaeota

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Isolation of an autotrophic ammonia-oxidizing marine archaeon

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

Primary Production of the Biosphere: Integrating Terrestrial and Oceanic Components

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4128106

A cryptic sulfur cycle in oxygen-minimum-zone waters off the Chilean coast

21 June 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1322132111

Metagenome of a versatile chemolithoautotroph from expanding oceanic dead zones

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1322132111

Evolution of an octahaem cytochrome c protein family that is key to aerobic and anaerobic ammonia oxidation by bacteria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1322132111

Isotopic signature of N(2)O produced by marine ammonia-oxidizing archaea

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1322132111

Oxygen minimum zones (OMZs) in the modern ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1322132111

Ocean deoxygenation: Past, present, and future

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1322132111

21 January 2018

Identifiers

DOI

10.1073/PNAS.1322132111

1 reference

14 October 2017

0 references

1 reference

14 October 2017

PubMed publication ID

25053816

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