Folding and ligand recognition of the TPP riboswitch aptamer at single-molecule resolution. (Q30537755)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23440214%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

title

Folding and ligand recognition of the TPP riboswitch aptamer at single-molecule resolution (English)

1 reference

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24 February 2020

1 reference

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24 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23440214%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

Andrea Haller

1 reference

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24 February 2020

Roger B Altman

series ordinal

1 reference

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24 February 2020

Ronald Micura

series ordinal

1 reference

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24 February 2020

language of work or name

English

0 references

publication date

25 February 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23440214%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

24 February 2020

published in

1 reference

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24 February 2020

volume

110

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24 February 2020

issue

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24 February 2020

page(s)

4188-4193

1 reference

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Fingerprinting noncanonical and tertiary RNA structures by differential SHAPE reactivity.

24 February 2020

cites work

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Allosteric tertiary interactions preorganize the c-di-GMP riboswitch and accelerate ligand binding

20 June 2018

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Transcriptional pausing coordinates folding of the aptamer domain and the expression platform of a riboswitch

20 June 2018

1 reference

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Folding energy landscape of the thiamine pyrophosphate riboswitch aptamer

20 June 2018

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20 June 2018

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Riboswitch structure in the ligand‐free state

20 June 2018

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20 June 2018

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20 June 2018

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Riboswitches: Structures and Mechanisms

20 June 2018

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Highly modular structure and ligand binding by conformational capture in a minimalistic riboswitch

20 June 2018

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Selective 2'-hydroxyl acylation analyzed by protection from exoribonuclease

20 June 2018

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Riboswitch function: flipping the switch or tuning the dimmer?

20 June 2018

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Multiple native states reveal persistent ruggedness of an RNA folding landscape

20 June 2018

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Multivector fluorescence analysis of the xpt guanine riboswitch aptamer domain and the conformational role of guanine

20 June 2018

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Idiosyncratically tuned switching behavior of riboswitch aptamer domains revealed by comparative small-angle X-ray scattering analysis

20 June 2018

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Determination of riboswitch structures: light at the end of the tunnel?

20 June 2018

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Thermodynamic analysis of ligand binding and ligand binding-induced tertiary structure formation by the thiamine pyrophosphate riboswitch

20 June 2018

1 reference

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The ligand-free state of the TPP riboswitch: a partially folded RNA structure

20 June 2018

1 reference

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The role of dynamic conformational ensembles in biomolecular recognition

20 June 2018

1 reference

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A switch in time: detailing the life of a riboswitch

20 June 2018

1 reference

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Mitigating unwanted photophysical processes for improved single-molecule fluorescence imaging

20 June 2018

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Riboswitches: ancient and promising genetic regulators

20 June 2018

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RNA dynamics: it is about time.

20 June 2018

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A practical guide to single-molecule FRET

20 June 2018

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Control of alternative RNA splicing and gene expression by eukaryotic riboswitches

20 June 2018

1 reference

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Identification of two distinct hybrid state intermediates on the ribosome

20 June 2018

1 reference

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Ligand binding and gene control characteristics of tandem riboswitches in Bacillus anthracis

20 June 2018

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Structures of RNA switches: insight into molecular recognition and tertiary structure

20 June 2018

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Crystal structures of the thi-box riboswitch bound to thiamine pyrophosphate analogs reveal adaptive RNA-small molecule recognition

20 June 2018

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Folding of the adenine riboswitch

20 June 2018

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Structural basis for gene regulation by a thiamine pyrophosphate-sensing riboswitch

20 June 2018

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Structure of the eukaryotic thiamine pyrophosphate riboswitch with its regulatory ligand

20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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20 June 2018

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Current topics in RNA-protein recognition: control of specificity and biological function through induced fit and conformational capture

20 June 2018

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Adaptive recognition by nucleic acid aptamers

20 June 2018

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Actin and tubulin polymerization: the use of kinetic methods to determine mechanism

20 June 2018

1 reference

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Tandem riboswitch architectures exhibit complex gene control functions.

20 June 2018

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RNA Folding During Transcription: Protocols and Studies

21 January 2018

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Ligand-induced folding of the thiM TPP riboswitch investigated by a structure-based fluorescence spectroscopic approach.

21 January 2018

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The preparation of site-specifically modified riboswitch domains as an example for enzymatic ligation of chemically synthesized RNA fragments.

21 January 2018

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Conformational capture of the SAM-II riboswitch

21 January 2018

1 reference

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A Single-Molecule Study of RNA Catalysis and Folding

21 January 2018

1 reference

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The Speed of RNA Transcription and Metabolite Binding Kinetics Operate an FMN Riboswitch

21 January 2018

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The dynamic nature of RNA as key to understanding riboswitch mechanisms

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23440214

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.1218062110

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23440214%20AND%20SRC:MED&resulttype=core&format=json

24 February 2020

0 references

1 reference

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24 February 2020

PubMed publication ID

23440214

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23440214%20AND%20SRC:MED&resulttype=core&format=json