Co-expression among constituents of a motif in the protein-protein interaction network (Q30491292)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19226657%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

title

Co-expression among constituents of a motif in the protein-protein interaction network (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19226657%20AND%20SRC:MED&resulttype=core&format=json

protein-protein interaction

21 January 2020

main subject

1 reference

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19226657%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

Nitin Bhardwaj

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19226657%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

publication date

1 February 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19226657%20AND%20SRC:MED&resulttype=core&format=json

Journal of Bioinformatics and Computational Biology

21 January 2020

published in

1 reference

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21 January 2020

volume

1 reference

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21 January 2020

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19226657%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

page(s)

1-17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19226657%20AND%20SRC:MED&resulttype=core&format=json

Functional clustering of yeast proteins from the protein-protein interaction network

21 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Stable evolutionary signal in a yeast protein interaction network

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Interactome-transcriptome analysis reveals the high centrality of genes differentially expressed in lung cancer tissues

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Computational verification of protein-protein interactions by orthologous co-expression

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

A first-draft human protein-interaction map

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Studying the interactome with the yeast two-hybrid system and mass spectrometry

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Evolution and topology in the yeast protein interaction network

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Protein interaction networks from yeast to human

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Evidence for dynamically organized modularity in the yeast protein-protein interaction network

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Coevolution of gene expression among interacting proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Genomic analysis of essentiality within protein networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Application of z-score transformation to Affymetrix data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Network biology: understanding the cell's functional organization

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Apparent dependence of protein evolutionary rate on number of interactions is linked to biases in protein-protein interactions data sets

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Protein complexes and functional modules in molecular networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Predicting protein function from protein/protein interaction data: a probabilistic approach

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Computational analyses of high-throughput protein-protein interaction data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Mass spectrometry-based proteomics

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Affinity purification-mass spectrometry. Powerful tools for the characterization of protein complexes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

The Stanford Microarray Database: data access and quality assessment tools

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Phage display: practicalities and prospects

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

No simple dependence between protein evolution rate and the number of protein-protein interactions: only the most prolific interactors tend to evolve slowly

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Network motifs: simple building blocks of complex networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Hierarchical organization of modularity in metabolic networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Functional profiling of the Saccharomyces cerevisiae genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Specificity and stability in topology of protein networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Network motifs in the transcriptional regulation network of Escherichia coli

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Relating whole-genome expression data with protein-protein interactions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Automatic clustering of orthologs and in-paralogs from pairwise species comparisons

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Serial regulation of transcriptional regulators in the yeast cell cycle

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

A relationship between gene expression and protein interactions on the proteome scale: analysis of the bacteriophage T7 and the yeast Saccharomyces cerevisiae

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

The tandem affinity purification (TAP) method: a general procedure of protein complex purification

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Protein--protein interaction maps: a lead towards cellular functions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Lethality and centrality in protein networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

A comprehensive two-hybrid analysis to explore the yeast protein interactome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

From molecular to modular cell biology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

Protein interaction maps for complete genomes based on gene fusion events

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

A generic protein purification method for protein complex characterization and proteome exploration

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

A novel genetic system to detect protein-protein interactions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2770376

The small world of metabolism.

20 June 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720009003959

From specific gene regulation to genomic networks: a global analysis of transcriptional regulation in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720009003959

Functional and topological characterization of protein interaction networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720009003959

Correlation between gene expression profiles and protein-protein interactions within and across genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720009003959

Subgraphs in random networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720009003959

Predicting essential genes in fungal genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1142%2FS0219720009003959

Evolutionary conservation of motif constituents in the yeast protein interaction network

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19226657

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Topological and causal structure of the yeast transcriptional regulatory network

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19226657

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1142/S0219720009003959

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19226657%20AND%20SRC:MED&resulttype=core&format=json

journals/jbcb/BhardwajL09

21 January 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19226657%20AND%20SRC:MED&resulttype=core&format=json

21 January 2020

PubMed publication ID

19226657

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19226657%20AND%20SRC:MED&resulttype=core&format=json