Gene regulatory network subcircuit controlling a dynamic spatial pattern of signaling in the sea urchin embryo (Q30485552)

18 August 2017

Gene regulatory network subcircuit controlling a dynamic spatial pattern of signaling in the sea urchin embryo (English)

1 reference

18 August 2017

1 reference

Joel Smith

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Eric H Davidson

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PMC publication ID

2629318

18 August 2017

language of work or name

English

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publication date

22 December 2008

1 reference

full work available at URL

18 August 2017

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inferred from page(s)

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2629318

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published in

Proceedings of the National Academy of Sciences of the United States of America

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18 August 2017

105

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18 August 2017

1 reference

18 August 2017

20089-20094

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A spatially dynamic cohort of regulatory genes in the endomesodermal gene network of the sea urchin embryo

18 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

The genome of the sea urchin Strongylocentrotus purpuratus

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

Genomics and expression profiles of the Hedgehog and Notch signaling pathways in sea urchin development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

Identification and developmental expression of the ets gene family in the sea urchin (Strongylocentrotus purpuratus).

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

cis-regulatory processing of Notch signaling input to the sea urchin glial cells missing gene during mesoderm specification

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

B lymphocyte-induced maturation protein (Blimp)-1, IFN regulatory factor (IRF)-1, and IRF-2 can bind to the same regulatory sites

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

Targeted inhibition of V(D)J recombination by a histone methyltransferase

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

Transcriptional regulatory cascades in development: initial rates, not steady state, determine network kinetics

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

The expression of SpRunt during sea urchin embryogenesis

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

A genomic regulatory network for development

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

Transgenic manipulation of the sea urchin embryo

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

Transcriptional repression by blimp-1 (PRDI-BF1) involves recruitment of histone deacetylase

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

Groucho proteins: transcriptional corepressors for specific subsets of DNA-binding transcription factors in vertebrates and invertebrates

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

A network of interacting transcriptional regulators involved in Drosophila neural fate specification revealed by the yeast two-hybrid system

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

Specificity for the hairy/enhancer of split basic helix-loop-helix (bHLH) proteins maps outside the bHLH domain and suggests two separable modes of transcriptional repression

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

Enhancer of splitD, a dominant mutation of Drosophila, and its use in the study of functional domains of a helix-loop-helix protein

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

The C2H2 zinc finger genes of Strongylocentrotus purpuratus and their expression in embryonic development

28 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

Identification and characterization of homeobox transcription factor genes in Strongylocentrotus purpuratus, and their expression in embryonic development

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

Gene families encoding transcription factors expressed in early development of Strongylocentrotus purpuratus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

Sea urchin Forkhead gene family: phylogeny and embryonic expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

Global regulatory logic for specification of an embryonic cell lineage

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

A Fringe-modified Notch signal affects specification of mesoderm and endoderm in the sea urchin embryo

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

Nuclear beta-catenin-dependent Wnt8 signaling in vegetal cells of the early sea urchin embryo regulates gastrulation and differentiation of endoderm and mesodermal cell lineages.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

cis-Regulatory inputs of the wnt8 gene in the sea urchin endomesoderm network.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

A gene regulatory network subcircuit drives a dynamic pattern of gene expression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

Expression and function of blimp1/krox, an alternatively transcribed regulatory gene of the sea urchin endomesoderm network

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

A missing link in the sea urchin embryo gene regulatory network: hesC and the double-negative specification of micromeres.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

Two modes of recruitment of E(spl) repressors onto target genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

A regulatory gene network that directs micromere specification in the sea urchin embryo.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

bHLH proteins encoded by the Enhancer of split complex of Drosophila negatively interfere with transcriptional activation mediated by proneural genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

An otx cis-regulatory module: a key node in the sea urchin endomesoderm gene regulatory network

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

PRDI-BF1 recruits the histone H3 methyltransferase G9a in transcriptional silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

Exclusive developmental functions of gatae cis-regulatory modules in the Strongylocentrorus purpuratus embryo

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

R11: a cis-regulatory node of the sea urchin embryo gene network that controls early expression of SpDelta in micromeres

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0806442105

LvDelta is a mesoderm-inducing signal in the sea urchin embryo and can endow blastomeres with organizer-like properties

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

A micromere induction signal is activated by beta-catenin and acts through notch to initiate specification of secondary mesenchyme cells in the sea urchin embryo

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

Identification and localization of a sea urchin Notch homologue: insights into vegetal plate regionalization and Notch receptor regulation

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2629318

Regulation of the human ADAMTS-4 promoter by transcription factors and cytokines

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19104065

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0806442105

1 reference

18 August 2017

0 references

1 reference

PMC publication ID

2629318

18 August 2017

PubMed publication ID

19104065

1 reference

PMC publication ID

2629318