CC+: a relational database of coiled-coil structures. (Q30372511)

12 October 2017

CC+: a relational database of coiled-coil structures. (English)

1 reference

12 October 2017

0 references

Oliver D Testa

1 reference

12 October 2017

Efrosini Moutevelis

series ordinal

1 reference

12 October 2017

Derek N Woolfson

series ordinal

1 reference

12 October 2017

language of work or name

English

0 references

publication date

8 October 2008

1 reference

12 October 2017

Nucleic Acids Research

1 reference

12 October 2017

1 reference

12 October 2017

Database issue

1 reference

12 October 2017

D315-22

1 reference

Predicting helix orientation for coiled-coil dimers

12 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Preferred side-chain constellations at antiparallel coiled-coil interfaces

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

The Pfam protein families database

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

4 June 2018

The 20 years of PROSITE

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

A seven-helix coiled coil

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

A conserved trimerization motif controls the topology of short coiled coils

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

The design of coiled-coil structures and assemblies

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

The structure of alpha-helical coiled coils

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Historical review: another 50th anniversary--new periodicities in coiled coils

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Investigating the tolerance of coiled-coil peptides to nonheptad sequence inserts

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Socket: a program for identifying and analysing coiled-coil motifs within protein structures.

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Coiled coils: a highly versatile protein folding motif

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Crystal structure of the CCAAT box/enhancer-binding protein beta activating transcription factor-4 basic leucine zipper heterodimer in the absence of DNA

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

An autonomous folding unit mediates the assembly of two-stranded coiled coils

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

CATH--a hierarchic classification of protein domain structures

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Coiled-coil assembly by peptides with non-heptad sequence motifs

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

MultiCoil: a program for predicting two- and three-stranded coiled coils

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Coiled coils: new structures and new functions

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Heptad breaks in alpha-helical coiled coils: stutters and stammers

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Predicting oligomerization states of coiled coils

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

SCOP: a structural classification of proteins database for the investigation of sequences and structures

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Predicting coiled coils by use of pairwise residue correlations

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

RASMOL: biomolecular graphics for all

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Coiled-coils in alpha-helix-containing proteins: analysis of the residue types within the heptad repeat and the use of these data in the prediction of coiled-coils in other proteins

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Basic local alignment search tool

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Predicting coiled coils from protein sequences

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

The Protein Data Bank: a computer-based archival file for macromolecular structures

4 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686509

Genome-wide identification of Arabidopsis coiled-coil proteins and establishment of the ARABI-COIL database

4 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN675

PQS: a protein quaternary structure file server

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN675

Extended knobs-into-holes packing in classical and complex coiled-coil assemblies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN675

An HMM model for coiled-coil domains and a comparison with PSSM-based predictions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN675

Comparative analysis of coiled-coil prediction methods.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN675

Statistical analysis of intrahelical ionic interactions in alpha-helices and coiled coils.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN675

Paircoil2: improved prediction of coiled coils from sequence.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKN675

Structural features in the heptad substructure and longer range repeats of two-stranded alpha-fibrous proteins

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18842638

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Three-stranded alpha-fibrous proteins: the heptad repeat and its implications for structure

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18842638

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKN675

1 reference

12 October 2017

journals/nar/TestaMW09

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

12 October 2017

PubMed publication ID

18842638

1 reference