Nuclear Magnetic Resonance Structures of GCN4p Are Largely Conserved When Ion Pairs Are Disrupted at Acidic pH but Show a Relaxation of the Coiled Coil Superhelix. (Q38946490)

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English	Nuclear Magnetic Resonance Structures of GCN4p Are Largely Conserved When Ion Pairs Are Disrupted at Acidic pH but Show a Relaxation of the Coiled Coil Superhelix.	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

7 September 2017

Nuclear Magnetic Resonance Structures of GCN4p Are Largely Conserved When Ion Pairs Are Disrupted at Acidic pH but Show a Relaxation of the Coiled Coil Superhelix (English)

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6355156&resulttype=core&format=json

13 May 2020

Richard A Kammerer

4

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6355156&resulttype=core&format=json

13 May 2020

Andrei T Alexandrescu

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13 May 2020

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Anne R Kaplan

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13 May 2020

Megan R Brady

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13 May 2020

Mark W Maciejewski

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13 May 2020

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publication date

23 February 2017

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7 September 2017

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13 May 2020

56

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13 May 2020

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13 May 2020

1604-1619

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13 May 2020

Contributions of the ionization states of acidic residues to the stability of the coiled coil domain of matrilin-1

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein titration in the crystal state.

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

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The coiled-coil trigger site of the rod domain of cortexillin I unveils a distinct network of interhelical and intrahelical salt bridges

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An intrahelical salt bridge within the trigger site stabilizes the GCN4 leucine zipper

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interaction of mastoparan with membranes studied by 1H-NMR spectroscopy in detergent micelles and by solid-state 2H-NMR and 15N-NMR spectroscopy in oriented lipid bilayers

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Solution NMR structure and folding dynamics of the N terminus of a rat non-muscle alpha-tropomyosin in an engineered chimeric protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Xplor-NIH NMR molecular structure determination package

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR studies of structure and function of biological macromolecules (Nobel lecture)

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

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Compound Helical Configurations of Polypeptide Chains: Structure of Proteins of the α-Keratin Type

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative evaluation of experimental NMR restraints.

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Extended knobs-into-holes packing in classical and complex coiled-coil assemblies.

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coiled coil domains: stability, specificity, and biological implications

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nuclear magnetic resonance spectroscopy of high-molecular-weight proteins.

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR structure determination in solution: a critique and comparison with X-ray crystallography

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The CCPN data model for NMR spectroscopy: development of a software pipeline

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The structure of alpha-helical coiled coils

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Two-, three-, and four-dimensional NMR methods for obtaining larger and more precise three-dimensional structures of proteins in solution.

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Periodicity of amide proton exchange rates in a coiled-coil leucine zipper peptide

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

ARIA2: automated NOE assignment and data integration in NMR structure calculation

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

High Apparent Dielectric Constant Inside a Protein Reflects Structural Reorganization Coupled to the Ionization of an Internal Asp

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evaluating protein structures determined by structural genomics consortia

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular basis of coiled-coil formation

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR spin state exchange spectroscopy reveals equilibrium of two distinct conformations of leucine zipper GCN4 in solution

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electrostatic contributions to the stability of the GCN4 leucine zipper structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hydrogen exchange of monomeric alpha-synuclein shows unfolded structure persists at physiological temperature and is independent of molecular crowding in Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The solution structure of a leucine-zipper motif peptide

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dynamic -Helix Structure of Micelle-bound Human Amylin

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of pseudorepeat rearrangement on alpha-synuclein misfolding, vesicle binding, and micelle binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Probing Designability via a Generalized Model of Helical Bundle Geometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electrostatic Contributions to the Stabilities of Native Proteins and Amyloid Complexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fragment screening using X-ray crystallography.

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural reorganization triggered by charging of Lys residues in the hydrophobic interior of a protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The effect of conformation on the CD of interacting helices: a theoretical study of tropomyosin

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein structural information derived from NMR chemical shift with the neural network program TALOS-N.

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mechanism of Protein Denaturation: Partial Unfolding of the P22 Coat Protein I-Domain by Urea Binding

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Solvent-induced distortions and the curvature of alpha-helices

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hemoglobin Structure and Respiratory Transport / M. F. Perutz. - (12.1978)

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Probing the folding mechanism of a leucine zipper peptide by stopped-flow circular dichroism spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The net energetic contribution of interhelical electrostatic attractions to coiled-coil stability

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Measurement of interhelical electrostatic interactions in the GCN4 leucine zipper

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein stability parameters measured by hydrogen exchange

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1H, 13C and 15N random coil NMR chemical shifts of the common amino acids. I. Investigations of nearest-neighbor effects

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Backbone dynamics of a highly disordered 131 residue fragment of staphylococcal nuclease

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

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A pulsed field gradient isotope-filtered 3D 13C HMQC-NOESY experiment for extracting intermolecular NOE contacts in molecular complexes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determination of the structure of symmetric coiled-coil proteins from NMR data: application of the leucine zipper proteins Jun and GCN4.

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Primary structure effects on peptide group hydrogen exchange

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A calculation strategy for the structure determination of symmetric dimers by 1H NMR.

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1H, 13C and 15N chemical shift referencing in biomolecular NMR

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interhelical Salt Bridges, Coiled-Coil Stability, and Specificity of Dimerization

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An evaluation of the use of hydrogen exchange at equilibrium to probe intermediates on the protein folding pathway

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Heteronuclear NMR assignments and secondary structure of the coiled coil trimerization domain from cartilage matrix protein in oxidized and reduced forms

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tenascin-C hexabrachion assembly is a sequential two-step process initiated by coiled-coil alpha-helices

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR structure of a parallel homotrimeric coiled coil

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An autonomous folding unit mediates the assembly of two-stranded coiled coils

1 reference

https://pubmed.ncbi.nlm.nih.gov/28230348

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1021/ACS.BIOCHEM.6B00634

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6355156&resulttype=core&format=json

13 May 2020

PMC publication ID

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Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6355156&resulttype=core&format=json

13 May 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=PMCID:PMC6355156&resulttype=core&format=json

13 May 2020

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