Oligonucleotide facilitators may inhibit or activate a hammerhead ribozyme (Q38362327)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8602353%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

title

Oligonucleotide facilitators may inhibit or activate a hammerhead ribozyme (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8602353%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

0 references

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8602353%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

B Schwenzer

1 reference

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15 October 2019

language of work or name

English

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publication date

1 February 1996

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8602353%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

published in

Nucleic Acids Research

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15 October 2019

volume

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15 October 2019

issue

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15 October 2019

page(s)

423-429

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Cleavage of full-length beta APP mRNA by hammerhead ribozymes

15 October 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Design and specificity of hammerhead ribozymes against calretinin mRNA.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

A kinetic and thermodynamic framework for the hammerhead ribozyme reaction

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Protein Enhancement of Hammerhead Ribozyme Catalysis

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Further studies on the use of oligonucleotide facilitators to increase ribozyme turnover.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Comparative hybrid arrest by tandem antisense oligodeoxyribonucleotides or oligodeoxyribonucleoside methylphosphonates in a cell-free system

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Use of EDTA derivatization to characterize interactions between oligodeoxyribonucleoside methylphosphonates and nucleic acids

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Improved free-energy parameters for predictions of RNA duplex stability

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Implications of ribozyme kinetics for targeting the cleavage of specific RNA molecules in vivo: more isn't always better

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Substrate sequence effects on "hammerhead" RNA catalytic efficiency

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Chimeric DNA-RNA hammerhead ribozymes have enhanced in vitro catalytic efficiency and increased stability in vivo

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Enhancement of ribozyme catalytic activity by a contiguous oligodeoxynucleotide (facilitator) and by 2'-O-methylation

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Inhibition of HIV-1 replication by ribozymes that show poor activity in vitro.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Effect of excess water on the desilylation of oligoribonucleotides using tetrabutylammonium fluoride

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Can hammerhead ribozymes be efficient tools to inactivate gene function?

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

The hammerhead RNA domain, a model ribozyme

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

An RNA chaperone activity of non-specific RNA binding proteins in hammerhead ribozyme catalysis

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Facilitation of hammerhead ribozyme catalysis by the nucleocapsid protein of HIV-1 and the heterogeneous nuclear ribonucleoprotein A1

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Amino acid requirements of the nucleocapsid protein of HIV-1 for increasing catalytic activity of a Ki-ras ribozyme in vitro.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Complete sequence of the human tissue factor gene, a highly regulated cellular receptor that initiates the coagulation protease cascade

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Ribozymes that cleave an RNA sequence from human immunodeficiency virus: the effect of flanking sequence on rate

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Hammerhead ribozyme-mediated cleavage of the long terminal repeat RNA of human immunodeficiency virus type 1.

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Role of divalent metal ions in the hammerhead RNA cleavage reaction

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Sequence requirements of the hammerhead RNA self-cleavage reaction

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

AUA-cleaving hammerhead ribozymes: attempted selection for improved cleavage

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Simple RNA enzymes with new and highly specific endoribonuclease activities

31 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=145664

Kinetics of intermolecular cleavage by hammerhead ribozymes

31 August 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8602353

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Multiple folded conformations of a hammerhead ribozyme domain under cleavage conditions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/8602353

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/24.3.423

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8602353%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8602353%20AND%20SRC:MED&resulttype=core&format=json

15 October 2019

PubMed publication ID

8602353

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8602353%20AND%20SRC:MED&resulttype=core&format=json