Molecular insights into the ligand-controlled organization of the SAM-I riboswitch (Q38335514)

2 September 2017

title

Molecular insights into the ligand-controlled organization of the SAM-I riboswitch (English)

1 reference

2 September 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21532599

1 December 2024

J. Carlos Penedo

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21532599

1 December 2024

Benoit Heppell

1 reference

2 September 2017

Simon Blouin

1 reference

2 September 2017

Anne-Marie Dussault

1 reference

2 September 2017

Jérôme Mulhbacher

1 reference

2 September 2017

Eric Ennifar

1 reference

2 September 2017

Daniel A. Lafontaine

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21532599

1 December 2024

language of work or name

English

1 reference

National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=21532599

1 December 2024

publication date

1 May 2011

1 reference

full work available at URL

2 September 2017

http://www.nature.com/articles/nchembio.563.pdf

file format

Portable Document Format

1 reference

https://api.crossref.org/works/10.1038/NCHEMBIO.563

http://www.nature.com/articles/nchembio.563

1 December 2024

1 reference

https://api.crossref.org/works/10.1038/NCHEMBIO.563

1 December 2024

published in

Nature Chemical Biology

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2 September 2017

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2 September 2017

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2 September 2017

page(s)

384-392

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Ribozymes, riboswitches and beyond: regulation of gene expression without proteins

2 September 2017

cites work

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The structural and functional diversity of metabolite-binding riboswitches

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A trans-acting riboswitch controls expression of the virulence regulator PrfA in Listeria monocytogenes

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Structures of RNA switches: insight into molecular recognition and tertiary structure

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Riboswitches: small-molecule recognition by gene regulatory RNAs

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Expanding roles for metabolite-sensing regulatory RNAs

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An RNA sensor for intracellular Mg(2+).

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A pH-responsive riboregulator

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Molecular basis for temperature sensing by an RNA thermometer

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Regulation of gene expression by effectors that bind to RNA.

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Design and antimicrobial action of purine analogues that bind Guanine riboswitches

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Novel riboswitch ligand analogs as selective inhibitors of guanine-related metabolic pathways

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Therapeutic applications of ribozymes and riboswitches

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Riboswitches that sense S-adenosylhomocysteine and activate genes involved in coenzyme recycling

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Transcription termination control of the S box system: direct measurement of S-adenosylmethionine by the leader RNA.

21 January 2018

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An mRNA structure that controls gene expression by binding S-adenosylmethionine

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Structure of the S-adenosylmethionine riboswitch regulatory mRNA element

21 January 2018

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Folding of the SAM aptamer is determined by the formation of a K-turn-dependent pseudoknot

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A tertiary structural element in S box leader RNAs is required for S-adenosylmethionine-directed transcription termination

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Riboswitches: emerging themes in RNA structure and function

21 January 2018

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Idiosyncratically tuned switching behavior of riboswitch aptamer domains revealed by comparative small-angle X-ray scattering analysis

21 January 2018

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The riboswitch-mediated control of sulfur metabolism in bacteria

21 January 2018

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Direct observation of hierarchical folding in single riboswitch aptamers

21 January 2018

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Analysis of global conformation of branched RNA species using electrophoresis and fluorescence

21 January 2018

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Mobility of DNA in gel electrophoresis.

21 January 2018

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A practical guide to single-molecule FRET

21 January 2018

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The aptamer core of SAM-IV riboswitches mimics the ligand-binding site of SAM-I riboswitches

21 January 2018

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RNA structure analysis at single nucleotide resolution by selective 2'-hydroxyl acylation and primer extension (SHAPE)

21 January 2018

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A mechanism for S-adenosyl methionine assisted formation of a riboswitch conformation: a small molecule with a strong arm

21 January 2018

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Crystal structure of the lysine riboswitch regulatory mRNA element

21 January 2018

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Folding of the adenine riboswitch

21 January 2018

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Interplay of 'induced fit' and preorganization in the ligand induced folding of the aptamer domain of the guanine binding riboswitch

21 January 2018

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Ligand-dependent folding of the three-way junction in the purine riboswitch

21 January 2018

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Ligand-induced folding of the thiM TPP riboswitch investigated by a structure-based fluorescence spectroscopic approach.

21 January 2018

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Multivector fluorescence analysis of the xpt guanine riboswitch aptamer domain and the conformational role of guanine

21 January 2018

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Structural transitions and thermodynamics of a glycine-dependent riboswitch from Vibrio cholerae

21 January 2018

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Free State Conformational Sampling of the SAM-I Riboswitch Aptamer Domain

21 January 2018

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Tertiary contacts control switching of the SAM-I riboswitch

21 January 2018

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Mutational Analysis of the Purine Riboswitch Aptamer Domain †

21 January 2018

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Riboswitch structure: an internal residue mimicking the purine ligand

21 January 2018

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mRNA secondary structures fold sequentially but exchange rapidly in vivo

21 January 2018

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Nonlocal helix formation is key to understanding S-adenosylmethionine-1 riboswitch function

21 January 2018

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Natural variability in S-adenosylmethionine (SAM)-dependent riboswitches: S-box elements in bacillus subtilis exhibit differential sensitivity to SAM In vivo and in vitro

21 January 2018

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The kinetics of ligand binding by an adenine-sensing riboswitch

21 January 2018

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RNA folding during transcription

21 January 2018

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Improved methods for building protein models in electron density maps and the location of errors in these models

21 January 2018

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

21 January 2018

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The Speed of RNA Transcription and Metabolite Binding Kinetics Operate an FMN Riboswitch

21 January 2018

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Folding of the lysine riboswitch: importance of peripheral elements for transcriptional regulation

21 January 2018

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PubMed

https://pubmed.ncbi.nlm.nih.gov/21532599

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Direct observation of the temperature-induced melting process of the Salmonella fourU RNA thermometer at base-pair resolution

1 reference

https://api.crossref.org/works/10.1038%2FNCHEMBIO.563

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/NCHEMBIO.563

1 reference

Dimensions Publication ID

2 September 2017

1014069253

0 references

1 reference