Lives that introns lead after splicing (Q38123746)

29 August 2017

title

Lives that introns lead after splicing (English)

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29 August 2017

Jay R Hesselberth

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29 August 2017

publication date

23 July 2013

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Wiley interdisciplinary reviews. RNA

29 August 2017

published in

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29 August 2017

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29 August 2017

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29 August 2017

page(s)

677-691

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The evolution of spliceosomal introns

29 August 2017

cites work

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Lariat RNA's as Intermediates and Products in the Splicing of Messenger RNA precursors

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A neoplastic gene fusion mimics trans-splicing of RNAs in normal human cells

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Numerous Fragmented Spliceosomal Introns, AT-AC Splicing, and an Unusual Dynein Gene Expression Pathway in Giardia lamblia

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Global analysis of trans-splicing in Drosophila.

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Bimolecular exon ligation by the human spliceosome bypasses early 3' splice site AG recognition and requires NTP hydrolysis

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Use of targetrons to disrupt essential and nonessential genes in Staphylococcus aureus reveals temperature sensitivity of Ll.LtrB group II intron splicing

21 January 2018

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Linear group II intron RNAs can retrohome in eukaryotes and may use nonhomologous end-joining for cDNA ligation.

21 January 2018

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Isolation and characterization of the gene encoding yeast debranching enzyme

21 January 2018

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Structure-function analysis of yeast RNA debranching enzyme (Dbr1), a manganese-dependent phosphodiesterase

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An Arabidopsis RNA lariat debranching enzyme is essential for embryogenesis.

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Human RNA lariat debranching enzyme cDNA complements the phenotypes of Saccharomyces cerevisiae dbr1 and Schizosaccharomyces pombe dbr1 mutants

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RNA branching and debranching in the yeast retrovirus-like element Ty1.

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The yeast retrotransposons Ty1 and Ty3 require the RNA Lariat debranching enzyme, Dbr1p, for efficient accumulation of reverse transcripts

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DBR1 siRNA inhibition of HIV-1 replication

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An evaluation of detection methods for large lariat RNAs

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Ty1 reverse transcriptase does not read through the proposed 2',5'-branched retrotransposition intermediate in vitro

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Inhibition of RNA lariat debranching enzyme suppresses TDP-43 toxicity in ALS disease models

21 January 2018

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A mechanism to enhance mRNA splicing fidelity: the RNA-dependent ATPase Prp16 governs usage of a discard pathway for aberrant lariat intermediates

21 January 2018

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Cytoplasmic degradation of splice-defective pre-mRNAs and intermediates

21 January 2018

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Global analysis of mRNA decay intermediates in Saccharomyces cerevisiae

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RNAse III-mediated degradation of unspliced pre-mRNAs and lariat introns

21 January 2018

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RNA degradation by the exosome is promoted by a nuclear polyadenylation complex

21 January 2018

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Distinct roles of non-canonical poly(A) polymerases in RNA metabolism

21 January 2018

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Spliceosome discards intermediates via the DEAH box ATPase Prp43p

21 January 2018

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A spliced intron accumulates as a lariat in the nucleus of T cells

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Intronic RNAs mediate EZH2 regulation of epigenetic targets

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Stable intronic sequence RNA (sisRNA), a new class of noncoding RNA from the oocyte nucleus of Xenopus tropicalis.

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Virus-induced neuronal apoptosis blocked by the herpes simplex virus latency-associated transcript.

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The stability and fate of a spliced intron from vertebrate cells

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Localization and stability of introns spliced from the Pem homeobox gene

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Isolation and characterization of post-splicing lariat-intron complexes

21 January 2018

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Dissection of the factor requirements for spliceosome disassembly and the elucidation of its dissociation products using a purified splicing system

21 January 2018

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Prp43 is an essential RNA-dependent ATPase required for release of lariat-intron from the spliceosome

21 January 2018

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The EF-G-like GTPase Snu114p regulates spliceosome dynamics mediated by Brr2p, a DExD/H box ATPase

21 January 2018

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Intronic sequence elements impede exon ligation and trigger a discard pathway that yields functional telomerase RNA in fission yeast

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Rapid, transcript-specific changes in splicing in response to environmental stress

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A quantitative, high-throughput reverse genetic screen reveals novel connections between Pre-mRNA splicing and 5' and 3' end transcript determinants

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Intronic snoRNA biosynthesis in Saccharomyces cerevisiae depends on the lariat-debranching enzyme: intron length effects and activity of a precursor snoRNA

21 January 2018

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A mammalian gene with introns instead of exons generating stable RNA products

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Long noncoding RNAs with snoRNA ends

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Intronic microRNA precursors that bypass Drosha processing

21 January 2018

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The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila

21 January 2018

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Many roads to maturity: microRNA biogenesis pathways and their regulation

21 January 2018

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MicroRNA biogenesis via splicing and exosome-mediated trimming in Drosophila

21 January 2018

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Discovery of hundreds of mirtrons in mouse and human small RNA data

21 January 2018

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Mirtrons, an emerging class of atypical miRNA.

21 January 2018

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CapSeq and CIP-TAP identify Pol II start sites and reveal capped small RNAs as C. elegans piRNA precursors

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The transcription start site landscape of C. elegans

21 January 2018

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Identification of transcription start sites of trans-spliced genes: uncovering unusual operon arrangements

21 January 2018

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Murine cytomegalovirus encodes a stable intron that facilitates persistent replication in the mouse

21 January 2018

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Region of herpes simplex virus type 1 latency-associated transcript sufficient for wild-type spontaneous reactivation promotes cell survival in tissue culture

21 January 2018

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Snapshots: chromatin control of viral infection

21 January 2018

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Transcription of the herpes simplex virus latency-associated transcript promotes the formation of facultative heterochromatin on lytic promoters

21 January 2018

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The polycomb group protein Bmi1 binds to the herpes simplex virus 1 latent genome and maintains repressive histone marks during latency

21 January 2018

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Long noncoding RNA as modular scaffold of histone modification complexes

21 January 2018

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RNA splicing and intron turnover are greatly diminished by a mutant yeast branch point

21 January 2018

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Animal virus schemes for translation dominance

21 January 2018

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The evolution of spliceosomal introns: patterns, puzzles and progress

21 January 2018

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On the origin of RNA splicing and introns

21 January 2018

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mRNA-type introns in U6 small nuclear RNA genes: implications for the catalysis in pre-mRNA splicing

21 January 2018

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Origins of recently gained introns in Caenorhabditis

21 January 2018

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A conformational rearrangement in the spliceosome sets the stage for Prp22-dependent mRNA release

21 January 2018

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RNA helicase dynamics in pre-mRNA splicing

21 January 2018

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The spliceosome: design principles of a dynamic RNP machine

21 January 2018

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Integrative genome-wide analysis reveals cooperative regulation of alternative splicing by hnRNP proteins

21 January 2018

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Intronic splicing enhancers, cognate splicing factors and context-dependent regulation rules

21 January 2018

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Steady progress and recent breakthroughs in the accuracy of automated genome annotation

21 January 2018

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Genome-wide identification of spliced introns using a tiling microarray

21 January 2018

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High-density yeast-tiling array reveals previously undiscovered introns and extensive regulation of meiotic splicing

21 January 2018

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Spliceosome disassembly catalyzed by Prp43 and its associated components Ntr1 and Ntr2.

21 January 2018

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Pervasive and dynamic protein binding sites of the mRNA transcriptome in Saccharomyces cerevisiae

21 January 2018

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Ultrashort and progressive 4sU-tagging reveals key characteristics of RNA processing at nucleotide resolution

21 January 2018

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Large-scale mapping of branchpoints in human pre-mRNA transcripts in vivo

21 January 2018

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Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing.

21 January 2018

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Efficient one-step synthesis of biologically related lariat RNAs by a deoxyribozyme

21 January 2018

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Convergent and general one-step DNA-catalyzed synthesis of multiply branched DNA.

21 January 2018

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Improved deoxyribozymes for synthesis of covalently branched DNA and RNA

21 January 2018

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Synthesis, characterization, and biological properties of small branched RNA fragments containing chiral (Rp and Sp) 2',5'-phosphorothioate linkages

21 January 2018

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21 January 2018

Identifiers

DOI

10.1002/WRNA.1187

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release_2pn5l4ccxbcg5pbyims6ewhsda

29 August 2017

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/2pn5l4ccxbcg5pbyims6ewhsda

mapped directly with Wikidata item

24 November 2022

based on heuristic

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