Epigenetic programming and reprogramming during development (Q38086774)

28 August 2017

title

Epigenetic programming and reprogramming during development (English)

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28 August 2017

Amanda G Fisher

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28 August 2017

Irene Cantone

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28 August 2017

language of work or name

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5 March 2013

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Nature Structural & Molecular Biology

28 August 2017

published in

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28 August 2017

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28 August 2017

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28 August 2017

page(s)

282-289

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An integrated encyclopedia of DNA elements in the human genome

28 August 2017

cites work

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The accessible chromatin landscape of the human genome

31 March 2020

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A Polycomb complex remains bound through DNA replication in the absence of other eukaryotic proteins

31 March 2020

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A bridging model for persistence of a polycomb group protein complex through DNA replication in vitro

31 March 2020

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TrxG and PcG proteins but not methylated histones remain associated with DNA through replication

31 March 2020

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Epigenetic memory and parliamentary privilege combine to evoke discussions on inheritance.

31 March 2020

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Molecular Signals of Epigenetic States

31 March 2020

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Dynamic chromatin modifications characterise the first cell cycle in mouse embryos.

31 March 2020

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Conservation of deposition-related acetylation sites in newly synthesized histones H3 and H4.

31 March 2020

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Consequences of the depletion of zygotic and embryonic enhancer of zeste 2 during preimplantation mouse development

31 March 2020

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Regulation of histone H3 lysine 9 methylation in oocytes and early pre-implantation embryos

31 March 2020

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PRC1 and Suv39h specify parental asymmetry at constitutive heterochromatin in early mouse embryos

31 March 2020

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Heterochromatin and tri-methylated lysine 20 of histone H4 in animals

31 March 2020

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H3K64 trimethylation marks heterochromatin and is dynamically remodeled during developmental reprogramming.

31 March 2020

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Dynamic alterations of specific histone modifications during early murine development

31 March 2020

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Differential dynamics of histone H3 methylation at positions K4 and K9 in the mouse zygote

31 March 2020

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Demethylation of the zygotic paternal genome

31 March 2020

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Dynamic reprogramming of DNA methylation in the early mouse embryo.

31 March 2020

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Replication-dependent loss of 5-hydroxymethylcytosine in mouse preimplantation embryos

31 March 2020

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A unique regulatory phase of DNA methylation in the early mammalian embryo

31 March 2020

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Parental epigenetic control of embryogenesis: a balance between inheritance and reprogramming?

31 March 2020

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Endogenous transcription occurs at the 1-cell stage in the mouse embryo

31 March 2020

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Regulation of transcriptional activity during the first and second cell cycles in the preimplantation mouse embryo.

31 March 2020

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Repression of gene expression at the beginning of mouse development.

31 March 2020

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The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes

31 March 2020

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Active demethylation of the paternal genome in the mouse zygote

31 March 2020

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Dynamic link of DNA demethylation, DNA strand breaks and repair in mouse zygotes.

31 March 2020

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Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1

31 March 2020

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Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA

31 March 2020

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Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine

31 March 2020

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Reprogramming of the paternal genome upon fertilization involves genome-wide oxidation of 5-methylcytosine

31 March 2020

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5-Hydroxymethylcytosine in the mammalian zygote is linked with epigenetic reprogramming

31 March 2020

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Generation and replication-dependent dilution of 5fC and 5caC during mouse preimplantation development.

31 March 2020

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Epigenetic reprogramming: is deamination key to active DNA demethylation?

31 March 2020

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Genome-wide reprogramming in the mouse germ line entails the base excision repair pathway

31 March 2020

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Mouse ooplasm confers context-specific reprogramming capacity

31 March 2020

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Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution

31 March 2020

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Base-resolution analysis of 5-hydroxymethylcytosine in the mammalian genome.

31 March 2020

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Safeguarding parental identity: Dnmt1 maintains imprints during epigenetic reprogramming in early embryogenesis

31 March 2020

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Maternal and zygotic Dnmt1 are necessary and sufficient for the maintenance of DNA methylation imprints during preimplantation development

31 March 2020

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Stella is a maternal effect gene required for normal early development in mice

31 March 2020

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PGC7/Stella protects against DNA demethylation in early embryogenesis

31 March 2020

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PGC7 binds histone H3K9me2 to protect against conversion of 5mC to 5hmC in early embryos

31 March 2020

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Resistance of IAPs to methylation reprogramming may provide a mechanism for epigenetic inheritance in the mouse.

31 March 2020

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The pre-implantation ontogeny of the H19 methylation imprint

31 March 2020

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A 5′ 2-Kilobase-Pair Region of the Imprinted Mouse H19 Gene Exhibits Exclusive Paternal Methylation throughout Development

31 March 2020

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The structural organization of sperm chromatin

31 March 2020

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Sperm-derived histones contribute to zygotic chromatin in humans.

31 March 2020

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A maternal-zygotic effect gene, Zfp57, maintains both maternal and paternal imprints

31 March 2020

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Trim28 is required for epigenetic stability during mouse oocyte to embryo transition.

31 March 2020

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The KRAB-ZFP/KAP1 system contributes to the early embryonic establishment of site-specific DNA methylation patterns maintained during development

31 March 2020

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In embryonic stem cells, ZFP57/KAP1 recognize a methylated hexanucleotide to affect chromatin and DNA methylation of imprinting control regions

31 March 2020

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Zinc finger protein ZFP57 requires its co-factor to recruit DNA methyltransferases and maintains DNA methylation imprint in embryonic stem cells via its transcriptional repression domain

31 March 2020

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SETDB1: a novel KAP-1-associated histone H3, lysine 9-specific methyltransferase that contributes to HP1-mediated silencing of euchromatic genes by KRAB zinc-finger proteins

31 March 2020

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Developmental fate and lineage commitment of singled mouse blastomeres

31 March 2020

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Cell fate decisions and axis determination in the early mouse embryo.

31 March 2020

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Hydroxylation of 5-methylcytosine by TET1 promotes active DNA demethylation in the adult brain

31 March 2020

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The foundation of two distinct cell lineages within the mouse morula.

31 March 2020

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Histone arginine methylation regulates pluripotency in the early mouse embryo

31 March 2020

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Chromatin states in pluripotent, differentiated, and reprogrammed cells

31 March 2020

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Chromatin signatures of pluripotent cell lines

31 March 2020

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A bivalent chromatin structure marks key developmental genes in embryonic stem cells

31 March 2020

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Asymmetrically modified nucleosomes

31 March 2020

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The Polycomb complex PRC2 and its mark in life

31 March 2020

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Phf19 links methylated Lys36 of histone H3 to regulation of Polycomb activity

31 March 2020

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Polycomb PHF19 binds H3K36me3 and recruits PRC2 and demethylase NO66 to embryonic stem cell genes during differentiation

31 March 2020

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CpG islands recruit a histone H3 lysine 36 demethylase

31 March 2020

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Genomewide analysis of PRC1 and PRC2 occupancy identifies two classes of bivalent domains

31 March 2020

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A signaling principle for the specification of the germ cell lineage in mice

31 March 2020

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Chromatin dynamics during epigenetic reprogramming in the mouse germ line

31 March 2020

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Extensive and orderly reprogramming of genome-wide chromatin modifications associated with specification and early development of germ cells in mice

31 March 2020

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The H3K27 demethylase Utx regulates somatic and germ cell epigenetic reprogramming

31 March 2020

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Histone methyltransferases G9a and GLP form heteromeric complexes and are both crucial for methylation of euchromatin at H3-K9

31 March 2020

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DNA methylation in ES cells requires the lysine methyltransferase G9a but not its catalytic activity

31 March 2020

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G9a/GLP complexes independently mediate H3K9 and DNA methylation to silence transcription

31 March 2020

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Complex genome-wide transcription dynamics orchestrated by Blimp1 for the specification of the germ cell lineage in mice

31 March 2020

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Critical function of Prdm14 for the establishment of the germ cell lineage in mice

31 March 2020

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The ubiquitin ligase Hyperplastic discs negatively regulates hedgehog and decapentaplegic expression by independent mechanisms

31 March 2020

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Erasure of methylation imprinting of Igf2r during mouse primordial germ-cell development

31 March 2020

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Adult mice cloned from migrating primordial germ cells

31 March 2020

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Promoter DNA methylation couples genome-defence mechanisms to epigenetic reprogramming in the mouse germline

31 March 2020

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Global profiling of DNA methylation erasure in mouse primordial germ cells

31 March 2020

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Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency.

31 March 2020

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X chromosome activity in mouse XX primordial germ cells

31 March 2020

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Tet1 controls meiosis by regulating meiotic gene expression

31 March 2020

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Thymine DNA glycosylase is essential for active DNA demethylation by linked deamination-base excision repair

31 March 2020

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Direct cell reprogramming is a stochastic process amenable to acceleration

31 March 2020

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Single-cell expression analyses during cellular reprogramming reveal an early stochastic and a late hierarchic phase

31 March 2020

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Effect of trichostatin A on chromatin remodeling, histone modifications, DNA replication, and transcriptional activity in cloned mouse embryos

31 March 2020

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Vitamin C enhances the generation of mouse and human induced pluripotent stem cells

31 March 2020

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Induction of pluripotent stem cells by defined factors is greatly improved by small-molecule compounds

31 March 2020

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Significant improvement of mouse cloning technique by treatment with trichostatin A after somatic nuclear transfer.

31 March 2020

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Butyrate promotes induced pluripotent stem cell generation

31 March 2020

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Butyrate greatly enhances derivation of human induced pluripotent stem cells by promoting epigenetic remodeling and the expression of pluripotency-associated genes.

31 March 2020

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Dissecting direct reprogramming through integrative genomic analysis

31 March 2020

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Role of the murine reprogramming factors in the induction of pluripotency

31 March 2020

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Wdr5 mediates self-renewal and reprogramming via the embryonic stem cell core transcriptional network

31 March 2020

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Induction of pluripotent stem cells from mouse embryonic fibroblasts by Oct4 and Klf4 with small-molecule compounds

31 March 2020

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A combined chemical and genetic approach for the generation of induced pluripotent stem cells

31 March 2020

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De novo DNA methylation promoted by G9a prevents reprogramming of embryonically silenced genes

31 March 2020

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G9a and Jhdm2a regulate embryonic stem cell fusion-induced reprogramming of adult neural stem cells

31 March 2020

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Chromatin remodelling during development

31 March 2020

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Chd1 regulates open chromatin and pluripotency of embryonic stem cells

31 March 2020

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An embryonic stem cell chromatin remodeling complex, esBAF, is an essential component of the core pluripotency transcriptional network.

31 March 2020

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esBAF facilitates pluripotency by conditioning the genome for LIF/STAT3 signalling and by regulating polycomb function

31 March 2020

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Chromatin-Remodeling Components of the BAF Complex Facilitate Reprogramming

31 March 2020

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Histone variants in metazoan development

31 March 2020

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Histone variant macroH2A confers resistance to nuclear reprogramming

31 March 2020

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Reprogramming Factor Expression Initiates Widespread Targeted Chromatin Remodeling

31 March 2020

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Heterokaryon-based reprogramming of human B lymphocytes for pluripotency requires Oct4 but not Sox2.

31 March 2020

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Reprogramming towards pluripotency requires AID-dependent DNA demethylation

31 March 2020

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DNA demethylation is necessary for the epigenetic reprogramming of somatic cell nuclei

31 March 2020

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Using heterokaryons to understand pluripotency and reprogramming

31 March 2020

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Embryonic stem cells induce pluripotency in somatic cell fusion through biphasic reprogramming

31 March 2020

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Defining molecular cornerstones during fibroblast to iPS cell reprogramming in mouse

31 March 2020

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Early-stage epigenetic modification during somatic cell reprogramming by Parp1 and Tet2

31 March 2020

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Epigenetic memory in induced pluripotent stem cells

31 March 2020

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Germline DNA demethylation dynamics and imprint erasure through 5-hydroxymethylcytosine

31 March 2020

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Requirement of mitoses for the reversal of X-inactivation in cell hybrids between murine embryonal carcinoma cells and normal female thymocytes

31 March 2020

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Full-term development of mice from enucleated oocytes injected with cumulus cell nuclei

31 March 2020

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Nuclear reprogramming of somatic cells by in vitro hybridization with ES cells

31 March 2020

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Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors

31 March 2020

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Differential H4 acetylation of paternal and maternal chromatin precedes DNA replication and differential transcriptional activity in pronuclei of 1-cell mouse embryos

31 March 2020

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12 December 2020

Embryonic genome activation

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12 December 2020

Erasing genomic imprinting memory in mouse clone embryos produced from day 11.5 primordial germ cells.

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12 December 2020

Packaging paternal chromosomes with protamine.

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12 December 2020

Mitochondria and the death of oocytes

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12 December 2020

Histone methylation defines epigenetic asymmetry in the mouse zygote

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12 December 2020

A fraction of mouse sperm chromatin is organized in nucleosomal hypersensitive domains enriched in retroposon DNA.

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12 December 2020

The developmental capacity of nuclei taken from intestinal epithelium cells of feeding tadpoles

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12 December 2020

Identifiers

DOI

10.1038/NSMB.2489

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Dimensions Publication ID

28 August 2017

1052458826

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