Chromosome-refolding model of mating-type switching in yeast (Q37417779)

20 August 2017

Chromosome-refolding model of mating-type switching in yeast (English)

1 reference

20 August 2017

1 reference

Barış Avşaroğlu

1 reference

20 August 2017

Gabriel Bronk

1 reference

20 August 2017

Kevin Li

1 reference

20 August 2017

James E Haber

1 reference

20 August 2017

Jane Kondev

1 reference

20 August 2017

language of work or name

English

0 references

publication date

24 October 2016

1 reference

Proceedings of the National Academy of Sciences of the United States of America

20 August 2017

1 reference

describes a project that uses

20 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC5111656/fullTextXML

inferred from PubMed Central ID database lookup

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Fkh1 and Fkh2 bind multiple chromosomal elements in the S. cerevisiae genome with distinct specificities and cell cycle dynamics

6 September 2017

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6 September 2017

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6 September 2017

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Regulation of budding yeast mating-type switching donor preference by the FHA domain of Fkh1

6 September 2017

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Higher-order chromatin structure: bridging physics and biology

6 September 2017

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Theoretical analysis of the role of chromatin interactions in long-range action of enhancers and insulators

6 September 2017

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Principles of chromosomal organization: lessons from yeast

6 September 2017

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Real-time analysis of double-strand DNA break repair by homologous recombination

6 September 2017

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The radial distribution function of worm-like chains.

6 September 2017

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The nuclear envelope in genome organization, expression and stability

6 September 2017

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The emerging role of nuclear architecture in DNA repair and genome maintenance

6 September 2017

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The meaning of gene positioning

6 September 2017

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Structure and dynamics of interphase chromosomes

6 September 2017

1 reference

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Controlled exchange of chromosomal arms reveals principles driving telomere interactions in yeast

6 September 2017

1 reference

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The nuclear envelope and transcriptional control.

6 September 2017

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Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions

6 September 2017

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Cell cycle-dependent regulation of Saccharomyces cerevisiae donor preference during mating-type switching by SBF (Swi4/Swi6) and Fkh1.

6 September 2017

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The dynamics of homologous pairing during mating type interconversion in budding yeast

6 September 2017

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Saccharomyces cerevisiae donor preference during mating-type switching is dependent on chromosome architecture and organization

6 September 2017

1 reference

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Recombination proteins in yeast

6 September 2017

1 reference

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Global chromatin structure of 45,000 base pairs of chromosome III in a- and alpha-cell yeast and during mating-type switching

6 September 2017

1 reference

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Gene recruitment of the activated INO1 locus to the nuclear membrane

6 September 2017

1 reference

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Mating type-dependent constraints on the mobility of the left arm of yeast chromosome III.

6 September 2017

1 reference

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Colocalization of multiple DNA double-strand breaks at a single Rad52 repair centre

6 September 2017

1 reference

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A conserved ER targeting motif in three families of lipid binding proteins and in Opi1p binds VAP

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Saccharomyces forkhead protein Fkh1 regulates donor preference during mating-type switching through the recombination enhancer

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Order and disorder in the nucleus

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Chromosome territories, nuclear architecture and gene regulation in mammalian cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Three new dominant drug resistance cassettes for gene disruption in Saccharomyces cerevisiae

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Mcm1 regulates donor preference controlled by the recombination enhancer in Saccharomyces mating-type switching

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

α2p controls donor preference during mating type interconversion in yeast by inactivating a recombinational enhancer of chromosome III

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Mechanism of MAT alpha donor preference during mating-type switching of Saccharomyces cerevisiae

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

The chromosome end in yeast: its mosaic nature and influence on recombinational dynamics

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Position effects in ectopic and allelic mitotic recombination in Saccharomyces cerevisiae

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

A three-dimensional model of the yeast genome

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Mapping in vivo chromatin interactions in yeast suggests an extended chromatin fiber with regional variation in compaction

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

High-throughput chromatin motion tracking in living yeast reveals the flexibility of the fiber throughout the genome

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Spatial dynamics of chromosome translocations in living cells.

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Physical tethering and volume exclusion determine higher-order genome organization in budding yeast

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

In Saccharomyces cerevisiae, yKu and subtelomeric core X sequences repress homologous recombination near telomeres as part of the same pathway

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

The association of yKu with subtelomeric core X sequences prevents recombination involving telomeric sequences

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Interphase chromosomes undergo constrained diffusional motion in living cells

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

GFP tagging of budding yeast chromosomes reveals that protein-protein interactions can mediate sister chromatid cohesion

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Chromosome positioning and the clustering of functionally related loci in yeast is driven by chromosomal interactions

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

Increased mobility of double-strand breaks requires Mec1, Rad9 and the homologous recombination machinery.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5111656

A Predictive Computational Model of the Dynamic 3D Interphase Yeast Nucleus

2 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1607103113

A 700 bp cis-Acting Region Controls Mating-Type Dependent Recombination Along the Entire Left Arm of Yeast Chromosome III

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.1607103113

Monitoring homology search during DNA double-strand break repair in vivo

21 January 2018

1 reference

12 December 2020

MATa donor preference in yeast mating-type switching: activation of a large chromosomal region for recombination

1 reference

12 December 2020

Mating-type Gene Switching in Saccharomyces cerevisiae

1 reference

12 December 2020

Global identification of yeast chromosome interactions using Genome conformation capture

1 reference

12 December 2020

Increased chromosome mobility facilitates homology search during recombination

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.1607103113

0 references

1 reference

20 August 2017

PubMed publication ID

27791086

1 reference