VIPERdb2: an enhanced and web API enabled relational database for structural virology (Q37202425)

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English	VIPERdb2: an enhanced and web API enabled relational database for structural virology	scientific article

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instance of

scholarly article

1 reference

stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

title

VIPERdb2: an enhanced and web API enabled relational database for structural virology (English)

1 reference

stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

main subject

virology

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database

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author

Mauricio Carrillo-Tripp

series ordinal

1

1 reference

stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

Sangita Venkataraman

series ordinal

4

1 reference

stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

Gabriel C. Lander

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5

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Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

author name string

Craig M Shepherd

series ordinal

2

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stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

Ian A Borelli

series ordinal

3

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stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

Padmaja Natarajan

series ordinal

6

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stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

John E Johnson

series ordinal

7

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Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

Charles L Brooks

series ordinal

8

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stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

Vijay S Reddy

series ordinal

9

1 reference

stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

language of work or name

English

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publication date

3 November 2008

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stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

published in

Nucleic Acids Research

1 reference

stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

volume

37

1 reference

stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

issue

Database issue

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stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

page(s)

D436-42

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stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

cites work

A note on difficult structure alignment problems.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

6 September 2017

VIPERdb: a relational database for structural virology

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

6 September 2017

Exploring icosahedral virus structures with VIPER.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

6 September 2017

TM-align: a protein structure alignment algorithm based on the TM-score

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

6 September 2017

UCSF Chimera--a visualization system for exploratory research and analysis

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

6 September 2017

A general method to quantify quasi-equivalence in icosahedral viruses

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

6 September 2017

Virus Particle Explorer (VIPER), a website for virus capsid structures and their computational analyses

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

6 September 2017

STRAP: editor for STRuctural Alignments of Proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

6 September 2017

The Protein Data Bank

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

6 September 2017

Knowledge-based protein secondary structure assignment

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

6 September 2017

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

6 September 2017

Multiple protein structure alignment

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

6 September 2017

MUSTANG: a multiple structural alignment algorithm

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

26 June 2018

A novel method to map and compare protein-protein interactions in spherical viral capsids.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

3 September 2018

A discrete view on fold space

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

3 September 2018

Extent of protein-protein interactions and quasi-equivalence in viral capsids

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

3 September 2018

3DCoffee: combining protein sequences and structures within multiple sequence alignments

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2686430

retrieved

3 September 2018

Identifiers

DOI

10.1093/NAR/GKN840

1 reference

stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

DBLP publication ID

journals/nar/Carrillo-TrippSBVLNJBR09

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

PMC publication ID

2686430

1 reference

stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

PubMed publication ID

18981051

1 reference

stated in

Europe PubMed Central

PMC publication ID

2686430

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18981051%20AND%20SRC:MED&resulttype=core&format=json

retrieved

25 December 2019

ResearchGate publication ID

23448424

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