Domain-oriented reduction of rule-based network models. (Q37066689)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19045829%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

title

Domain-oriented reduction of rule-based network models (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19045829%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19045829%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19045829%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

N M Borisov

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19045829%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

A S Chistopolsky

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19045829%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

publication date

1 September 2008

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17 January 2020

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17 January 2020

volume

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17 January 2020

issue

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17 January 2020

page(s)

342-351

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19045829%20AND%20SRC:MED&resulttype=core&format=json

Rule-based modeling of biochemical systems with BioNetGen

17 January 2020

cites work

1 reference

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Kinetic Monte Carlo method for rule-based modeling of biochemical networks.

29 September 2017

1 reference

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Ligand-dependent responses of the ErbB signaling network: experimental and modeling analyses

29 September 2017

1 reference

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Structure-based kinetic models of modular signaling protein function: focus on Shp2.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Scaffolding protein Grb2-associated binder 1 sustains epidermal growth factor-induced mitogenic and survival signaling by multiple positive feedback loops

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks

29 September 2017

1 reference

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Trading the micro-world of combinatorial complexity for the macro-world of protein interaction domains.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Signaling through receptors and scaffolds: independent interactions reduce combinatorial complexity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Automatic generation of cellular reaction networks with Moleculizer 1.0.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

BioNetGen: software for rule-based modeling of signal transduction based on the interactions of molecular domains

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Mathematical and computational models of immune-receptor signalling

29 September 2017

1 reference

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The complexity of complexes in signal transduction.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Assembly of Cell Regulatory Systems Through Protein Interaction Domains

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Structural biology of insulin and IGF1 receptors: implications for drug design

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Untangling the ErbB signalling network

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Cell signaling by receptor tyrosine kinases

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Scaffold proteins may biphasically affect the levels of mitogen-activated protein kinase signaling and reduce its threshold properties

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Signal transduction: hanging on a scaffold.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

A free-energy-based stochastic simulation of the Tar receptor complex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Chemical kinetic theory: understanding cell-cycle regulation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Reduced modeling of signal transduction - a modular approach

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

STOCHSIM: modelling of stochastic biomolecular processes.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Combinatorial complexity and dynamical restriction of network flows in signal transduction.

27 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

A network model of early events in epidermal growth factor receptor signaling that accounts for combinatorial complexity

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Common and distinct elements in cellular signaling via EGF and FGF receptors

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Investigation of early events in Fc epsilon RI-mediated signaling using a detailed mathematical model

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Predicting temporal fluctuations in an intracellular signalling pathway

4 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2628550

Quantification of Short Term Signaling by the Epidermal Growth Factor Receptor

4 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19045829

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1049/IET-SYB:20070081

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19045829%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19045829%20AND%20SRC:MED&resulttype=core&format=json

17 January 2020

PubMed publication ID

19045829

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19045829%20AND%20SRC:MED&resulttype=core&format=json