Comprehensive detection of human terminal oligo-pyrimidine (TOP) genes and analysis of their characteristics (Q36740139)

16 August 2017

Comprehensive detection of human terminal oligo-pyrimidine (TOP) genes and analysis of their characteristics (English)

1 reference

16 August 2017

Sumio Sugano

1 reference

16 August 2017

Yutaka Suzuki

1 reference

16 August 2017

Riu Yamashita

1 reference

16 August 2017

Hiroyuki Wakaguri

1 reference

16 August 2017

Kenta Nakai

1 reference

16 August 2017

Nono Takeuchi

1 reference

16 August 2017

Takuya Ueda

1 reference

PMC publication ID

2441802

16 August 2017

language of work or name

English

0 references

publication date

14 May 2008

1 reference

16 August 2017

Nucleic Acids Research

1 reference

16 August 2017

1 reference

16 August 2017

1 reference

16 August 2017

3707-3715

1 reference

Ribosomal protein S6 phosphorylation: from protein synthesis to cell size.

16 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

DBTSS: DataBase of Human Transcription Start Sites, progress report 2006.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

TOPs and their regulation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Evolutionary significance of gene expression divergence

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

The architecture of mammalian ribosomal protein promoters

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Effect of 3'UTR length on the translational regulation of 5'-terminal oligopyrimidine mRNAs.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

A gene atlas of the mouse and human protein-encoding transcriptomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

DBTSS, DataBase of Transcriptional Start Sites: progress report 2004.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Regulation of ribosomal protein mRNA content and translation in growth-stimulated mouse fibroblasts.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

The 5' terminal oligopyrimidine tract of human elongation factor 1A-1 gene functions as a transcriptional initiator and produces a variable number of Us at the transcriptional level

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

The human ribosomal protein genes: sequencing and comparative analysis of 73 genes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

DBTSS: DataBase of human Transcriptional Start Sites and full-length cDNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Diverse transcriptional initiation revealed by fine, large-scale mapping of mRNA start sites

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

CART classification of human 5' UTR sequences

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

An encore for ribosome biogenesis in the control of cell proliferation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Gene ontology: tool for the unification of biology

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Primer3 on the WWW for general users and for biologist programmers

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

High efficiency selection of full-length cDNA by improved biotinylated cap trapper.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Experimentally determined weight matrix definitions of the initiator and TBP binding site elements of promoters

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Construction of a human full-length cDNA bank

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Use of the human elongation factor 1 alpha promoter as a versatile and efficient expression system

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Oligopyrimidine tract at the 5' end of mammalian ribosomal protein mRNAs is required for their translational control

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

TOP genes: a translationally controlled class of genes including those coding for ribosomal proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Tissue-specific transcriptional regulation has diverged significantly between human and mouse

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Translational regulation of terminal oligopyrimidine mRNAs induced by serum and amino acids involves distinct signaling events

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Down-regulation of the mitochondrial translation system during terminal differentiation of HL-60 cells by 12-O-tetradecanoyl-1-phorbol-13-acetate: comparison with the cytoplasmic translation system

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

From small flies come big discoveries about size control

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Translational control of specific genes during differentiation of HL-60 cells

5 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2441802

Identification and characterization of CDC50A, CDC50B and CDC50C genes in silico

5 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18480124

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Conservation and coevolution in the scale-free human gene coexpression network

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18480124

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKN248

1 reference

16 August 2017

1 reference

PMC publication ID

2441802

16 August 2017

PubMed publication ID

18480124

1 reference

PMC publication ID

2441802