H2A.Z facilitates access of active and repressive complexes to chromatin in embryonic stem cell self-renewal and differentiation. (Q36604868)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23260488%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

title

H2A.Z facilitates access of active and repressive complexes to chromatin in embryonic stem cell self-renewal and differentiation (English)

1 reference

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21 February 2020

main subject

stem cell self-renewal

1 reference

1 reference

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21 February 2020

1 reference

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21 February 2020

David Levens

1 reference

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21 February 2020

Kairong Cui

1 reference

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21 February 2020

Daniel Northrup

1 reference

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21 February 2020

Chengyu Liu

1 reference

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21 February 2020

Chaochen Wang

1 reference

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21 February 2020

Qingsong Tang

1 reference

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21 February 2020

Colyn Crane-Robinson

1 reference

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21 February 2020

Keji Zhao

1 reference

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21 February 2020

language of work or name

English

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publication date

20 December 2012

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21 February 2020

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21 February 2020

volume

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21 February 2020

issue

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21 February 2020

page(s)

180-192

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H2A.Z landscapes and dual modifications in pluripotent and multipotent stem cells underlie complex genome regulatory functions

21 February 2020

cites work

1 reference

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Rapid genome-scale mapping of chromatin accessibility in tissue

30 September 2017

1 reference

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Gene reactivation by 5-aza-2'-deoxycytidine-induced demethylation requires SRCAP-mediated H2A.Z insertion to establish nucleosome depleted regions

30 September 2017

1 reference

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Dynamic chromatin states in human ES cells reveal potential regulatory sequences and genes involved in pluripotency.

30 September 2017

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H3K4 tri-methylation provides an epigenetic signature of active enhancers

30 September 2017

1 reference

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Regulation of nucleosome landscape and transcription factor targeting at tissue-specific enhancers by BRG1

30 September 2017

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Acetylation of H2A.Z is a key epigenetic modification associated with gene deregulation and epigenetic remodeling in cancer

30 September 2017

1 reference

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Wdr5 mediates self-renewal and reprogramming via the embryonic stem cell core transcriptional network

30 September 2017

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Mapping and analysis of chromatin state dynamics in nine human cell types

30 September 2017

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A unique chromatin signature uncovers early developmental enhancers in humans

30 September 2017

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Histone H3K27ac separates active from poised enhancers and predicts developmental state

30 September 2017

1 reference

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A unique H3K4me2 profile marks tissue-specific gene regulation

30 September 2017

1 reference

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Changes in H2A.Z occupancy and DNA methylation during B-cell lymphomagenesis

30 September 2017

1 reference

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Nucleosome dynamics define transcriptional enhancers

30 September 2017

1 reference

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High nucleosome occupancy is encoded at human regulatory sequences

30 September 2017

1 reference

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Characterization of the histone H2A.Z-1 and H2A.Z-2 isoforms in vertebrates

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

Chromatin remodeling by imitation switch (ISWI) class ATP-dependent remodelers is stimulated by histone variant H2A.Z.

30 September 2017

1 reference

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The euchromatic and heterochromatic landscapes are shaped by antagonizing effects of transcription on H2A.Z deposition

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

H3.3/H2A.Z double variant-containing nucleosomes mark 'nucleosome-free regions' of active promoters and other regulatory regions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

Histone methylation regulator PTIP is required for PPARgamma and C/EBPalpha expression and adipogenesis

30 September 2017

1 reference

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A clustering approach for identification of enriched domains from histone modification ChIP-Seq data

30 September 2017

1 reference

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Comparative analysis of H2A.Z nucleosome organization in the human and yeast genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

Chromatin signatures in multipotent human hematopoietic stem cells indicate the fate of bivalent genes during differentiation

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

H2AZ is enriched at polycomb complex target genes in ES cells and is necessary for lineage commitment

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks

30 September 2017

1 reference

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Genome-scale DNA methylation maps of pluripotent and differentiated cells

30 September 2017

1 reference

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Combinatorial patterns of histone acetylations and methylations in the human genome

30 September 2017

1 reference

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Dynamic regulation of nucleosome positioning in the human genome

30 September 2017

1 reference

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H2A.Z: view from the top.

30 September 2017

1 reference

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Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

30 September 2017

1 reference

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Nucleosome stability mediated by histone variants H3.3 and H2A.Z.

30 September 2017

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High-resolution profiling of histone methylations in the human genome

30 September 2017

1 reference

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PTIP associates with MLL3- and MLL4-containing histone H3 lysine 4 methyltransferase complex

30 September 2017

1 reference

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Genome regulation by polycomb and trithorax proteins

30 September 2017

1 reference

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Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome

30 September 2017

1 reference

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Genome-wide prediction of conserved and nonconserved enhancers by histone acetylation patterns

30 September 2017

1 reference

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Regulation of MLL1 H3K4 methyltransferase activity by its core components

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

The replacement histone H2A.Z in a hyperacetylated form is a feature of active genes in the chicken

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

Opposing FGF and retinoid pathways: a signalling switch that controls differentiation and patterning onset in the extending vertebrate body axis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

SUZ12 is required for both the histone methyltransferase activity and the silencing function of the EED-EZH2 complex

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

Pericentric heterochromatin becomes enriched with H2A.Z during early mammalian development

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

An acetylated form of histone H2A.Z regulates chromosome architecture in Schizosaccharomyces pombe

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

RARγ is required for correct deposition and removal of Suz12 and H2A.Z in embryonic stem cells

28 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

Histone H2A.Z acetylation modulates an essential charge patch

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

Histone H2A.Z is widely but nonrandomly distributed in chromosomes of Drosophila melanogaster

20 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3570599

The essential histone variant H2A.Z regulates the equilibrium between different chromatin conformational states

20 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23260488

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

H2A.Z alters the nucleosome surface to promote HP1alpha-mediated chromatin fiber folding

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23260488

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

H2A.Z stabilizes chromatin in a way that is dependent on core histone acetylation

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23260488

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.STEM.2012.11.003

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23260488%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23260488%20AND%20SRC:MED&resulttype=core&format=json

21 February 2020

PubMed publication ID

23260488

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23260488%20AND%20SRC:MED&resulttype=core&format=json