New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures (Q36491328)

14 August 2017

New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures (English)

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14 August 2017

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14 August 2017

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14 August 2017

Natalie L Dawson

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Robert Rentzsch

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Ian Sillitoe

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14 August 2017

Christine A Orengo

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14 August 2017

Jonathan G Lees

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14 August 2017

Corin Yeats

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14 August 2017

Benoit H Dessailly

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14 August 2017

Nicholas Furnham

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14 August 2017

Alison L Cuff

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14 August 2017

David Lee

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14 August 2017

Tony E Lewis

series ordinal

1 reference

14 August 2017

language of work or name

English

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publication date

29 November 2012

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14 August 2017

Nucleic Acids Research

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14 August 2017

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14 August 2017

Database issue

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14 August 2017

D490-8

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Creative Commons Attribution-NonCommercial 3.0 Unported

14 August 2017

start time

4 October 2016

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April 2022 Public Data File from Crossref

copyrighted

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cites work

Evolutionarily consistent families in SCOP: sequence, structure and function

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Gene3D: a domain-based resource for comparative genomics, functional annotation and protein network analysis

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Reorganizing the protein space at the Universal Protein Resource (UniProt)

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

The Gene Ontology: enhancements for 2011

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

MACiE: exploring the diversity of biochemical reactions

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

FunTree: a resource for exploring the functional evolution of structurally defined enzyme superfamilies

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Extending CATH: increasing coverage of the protein structure universe and linking structure with function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Structural classification of proteins and structural genomics: new insights into protein folding and evolution

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

A fast and automated solution for accurately resolving protein domain architectures.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

GeMMA: functional subfamily classification within superfamilies of predicted protein structural domains

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Gene3D: merging structure and function for a Thousand genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

CATHEDRAL: a fast and effective algorithm to predict folds and domain boundaries from multidomain protein structures.

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Gene3D: comprehensive structural and functional annotation of genomes

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Data growth and its impact on the SCOP database: new developments

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Assessing strategies for improved superfamily recognition

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

The Catalytic Site Atlas: a resource of catalytic sites and residues identified in enzymes using structural data

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

COMPASS: a complex of proteins associated with a trithorax-related SET domain protein

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Structural basis for the catalytic mechanism of a proficient enzyme: orotidine 5'-monophosphate decarboxylase

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

The ENZYME database in 2000

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

The crystal structure of Lactococcus lactis dihydroorotate dehydrogenase A complexed with the enzyme reaction product throws light on its enzymatic function

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

SSAP: sequential structure alignment program for protein structure comparison

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Identification of zinc-binding ligands in the class II fructose-1,6-bisphosphate aldolase of Escherichia coli

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Domain shuffling and the evolution of vertebrates

30 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Structural diversity of domain superfamilies in the CATH database

21 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3531114

Functional information in SWISS-PROT: The basis for large-scale characterisation of protein sequences

21 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKS1211

δ‐aminolevulinate dehydrase: a new genetic polymorphism in man

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23203873

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKS1211

1 reference

journals/nar/SillitoeCDDFLLLSRYTO13

14 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

14 August 2017

PubMed publication ID

23203873

1 reference