Genome Wide Association Study of Seedling and Adult Plant Leaf Rust Resistance in Elite Spring Wheat Breeding Lines (Q35915862)

11 August 2017

Genome Wide Association Study of Seedling and Adult Plant Leaf Rust Resistance in Elite Spring Wheat Breeding Lines (English)

1 reference

genome-wide association study

11 August 2017

0 references

1 reference

Liangliang Gao

0 references

Shiaoman Chao

1 reference

11 August 2017

M Kathryn Turner

1 reference

11 August 2017

James Kolmer

series ordinal

1 reference

11 August 2017

James A Anderson

series ordinal

1 reference

11 August 2017

language of work or name

English

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publication date

5 February 2016

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11 August 2017

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11 August 2017

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11 August 2017

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11 August 2017

e0148671

1 reference

Creative Commons CC0 License

11 August 2017

start time

5 February 2016

1 reference

April 2022 Public Data File from Crossref

copyrighted, dedicated to the public domain by copyright holder

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describes a project that uses

genome-wide association study

1 reference

LIMMA

2 references

22 June 2022

https://europepmc.org/article/PMC/4744023

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

Association mapping of North American spring wheat breeding germplasm reveals loci conferring resistance to Ug99 and other African stem rust races

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Comparison of Genomic Selection Models to Predict Flowering Time and Spike Grain Number in Two Hexaploid Wheat Doubled Haploid Populations

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Genome-Wide Association Mapping for Resistance to Leaf and Stripe Rust in Winter-Habit Hexaploid Wheat Landraces.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

A haplotype map of allohexaploid wheat reveals distinct patterns of selection on homoeologous genomes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

A whole-genome shotgun approach for assembling and anchoring the hexaploid bread wheat genome

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

A genome-wide association study of resistance to stripe rust (Puccinia striiformis f. sp. tritici) in a worldwide collection of hexaploid spring wheat (Triticum aestivum L.).

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Genome-wide association mapping for seedling and adult plant resistance to stripe rust in synthetic hexaploid wheat

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Association analysis of stem rust resistance in U.S. winter wheat

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome

11 July 2018

1 reference

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Comparison of methods to account for relatedness in genome-wide association studies with family-based data

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Characterization of polyploid wheat genomic diversity using a high-density 90,000 single nucleotide polymorphism array

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Genome-wide comparative diversity uncovers multiple targets of selection for improvement in hexaploid wheat landraces and cultivars

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

A physical, genetic and functional sequence assembly of the barley genome

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Wheat TaRab7 GTPase is part of the signaling pathway in responses to stripe rust and abiotic stimuli

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Genome-wide association studies for agronomical traits in a world wide spring barley collection

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

A robust, simple genotyping-by-sequencing (GBS) approach for high diversity species

11 July 2018

1 reference

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Mixed linear model approach adapted for genome-wide association studies

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Prioritizing GWAS results: A review of statistical methods and recommendations for their application

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

A putative ABC transporter confers durable resistance to multiple fungal pathogens in wheat

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

PLINK: a tool set for whole-genome association and population-based linkage analyses

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

TASSEL: software for association mapping of complex traits in diverse samples

11 July 2018

1 reference

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CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Haploview: analysis and visualization of LD and haplotype maps

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Inference of population structure using multilocus genotype data

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Mapping resistance to the Ug99 race group of the stem rust pathogen in a spring wheat landrace.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Insights into the maize pan-genome and pan-transcriptome

24 September 2018

1 reference

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GAPIT: genome association and prediction integrated tool

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

Association mapping and gene-gene interaction for stem rust resistance in CIMMYT spring wheat germplasm.

24 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4744023

A multiple testing correction method for genetic association studies using correlated single nucleotide polymorphisms

24 September 2018

1 reference

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Status and Prospects of Association Mapping in Plants

24 September 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0148671

Association mapping of leaf rust response in durum wheat

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0148671

Association Mapping Reveals Novel Stem Rust Resistance Loci in Durum Wheat at the Seedling Stage

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0148671

Single nucleotide polymorphism genotyping using Kompetitive Allele Specific PCR (KASP): overview of the technology and its application in crop improvement

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0148671

Molecular genetic characterization of the Lr34/Yr18 slow rusting resistance gene region in wheat

21 January 2018

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12 December 2020

Identification of novel QTLs for seedling and adult plant leaf rust resistance in a wheat doubled haploid population

1 reference

12 December 2020

Association genetics in crop improvement

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12 December 2020

Validation and identification of molecular markers linked to the leaf rust resistance gene Lr28 in wheat

1 reference

12 December 2020

Analysis of leaf and stripe rust severities reveals pathotype changes and multiple minor QTLs associated with resistance in an Avocet × Pastor wheat population

1 reference

12 December 2020

First Detection in North America of Virulence in Wheat Leaf Rust (Puccinia triticina) to Seedling Plants of Wheat with Lr21

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0148671

Identifiers

DOI

1 reference

11 August 2017

0 references

1 reference

11 August 2017

PubMed publication ID

26849364

1 reference