Effects of non-nearest neighbors on the thermodynamic stability of RNA GNRA hairpin tetraloops (Q35843086)

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scientific article published on 8 March 2012

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English	Effects of non-nearest neighbors on the thermodynamic stability of RNA GNRA hairpin tetraloops	scientific article published on 8 March 2012

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instance of

scholarly article

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Europe PubMed Central

PMC publication ID

3309161

retrieved

10 August 2017

title

Effects of non-nearest neighbors on the thermodynamic stability of RNA GNRA hairpin tetraloops (English)

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stated in

Europe PubMed Central

PMC publication ID

3309161

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10 August 2017

main subject

nearest neighbour algorithm

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based on heuristic

inferred from title

author

Brent M Znosko

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3

object named as

Brent M Znosko

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Europe PubMed Central

PMC publication ID

3309161

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10 August 2017

author name string

Pamela L Vanegas

series ordinal

1

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Europe PubMed Central

PMC publication ID

3309161

retrieved

10 August 2017

Teresa S Horwitz

series ordinal

2

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Europe PubMed Central

PMC publication ID

3309161

retrieved

10 August 2017

language of work or name

English

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publication date

8 March 2012

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Europe PubMed Central

PMC publication ID

3309161

retrieved

10 August 2017

published in

Biochemistry

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stated in

Europe PubMed Central

PMC publication ID

3309161

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10 August 2017

volume

51

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stated in

Europe PubMed Central

PMC publication ID

3309161

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10 August 2017

issue

11

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Europe PubMed Central

PMC publication ID

3309161

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10 August 2017

page(s)

2192-2198

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Europe PubMed Central

PMC publication ID

3309161

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10 August 2017

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Non-nearest-neighbor dependence of the stability for RNA group II single-nucleotide bulge loops

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Positional and Neighboring Base Pair Effects on the Thermodynamic Stability of RNA Single Mismatches

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11 July 2018

Thermodynamic characterization of naturally occurring RNA tetraloops

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Non-nearest-neighbor dependence of the stability for RNA bulge loops based on the complete set of group I single-nucleotide bulge loops

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A set of nearest neighbor parameters for predicting the enthalpy change of RNA secondary structure formation

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Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

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Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs

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Characterization of RNA hairpin loop stability

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Thermodynamic parameters for loop formation in RNA and DNA hairpin tetraloops

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11 July 2018

Contribution of the closing base pair to exceptional stability in RNA tetraloops: roles for molecular mimicry and electrostatic factors.

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Thermodynamic characterization of naturally occurring RNA single mismatches with G-U nearest neighbors

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Sequence dependence of the stability of RNA hairpin molecules with six nucleotide loops

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Stability of RNA hairpin loops closed by AU base pairs

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Stability of RNA Hairpins Closed by Wobble Base Pairs

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Thermodynamics of single mismatches in RNA duplexes

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A model for the stabilities of RNA hairpins based on a study of the sequence dependence of stability for hairpins of six nucleotides

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12 December 2020

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Predicting thermodynamic properties of RNA

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12 December 2020

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Improved parameters for the prediction of RNA hairpin stability

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/22329761

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12 December 2020

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Thermodynamic characterization of RNA duplexes containing naturally occurring 1 x 2 nucleotide internal loops

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/22329761

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1021/BI300008J

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Europe PubMed Central

PMC publication ID

3309161

retrieved

10 August 2017

Fatcat ID

release_ozguqfdgxvcq7ge6cz4lpwih7e

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Fatcat

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https://api.fatcat.wiki/v0/release/ozguqfdgxvcq7ge6cz4lpwih7e

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24 November 2022

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PMC publication ID

3309161

1 reference

stated in

Europe PubMed Central

PMC publication ID

3309161

retrieved

10 August 2017

PubMed publication ID

22329761

1 reference

stated in

Europe PubMed Central

PMC publication ID

3309161

retrieved

10 August 2017

ResearchGate publication ID

221828044

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