Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates (Q35499095)

8 August 2017

title

Sperm methylation profiles reveal features of epigenetic inheritance and evolution in primates (English)

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8 August 2017

primates

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1 reference

8 August 2017

Qiang Song

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Antoine Molaro

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Emily Hodges

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Andrew D Smith

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Gregory J Hannon

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8 August 2017

Fang Fang

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8 August 2017

language of work or name

English

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publication date

1 September 2011

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8 August 2017

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8 August 2017

volume

146

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8 August 2017

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8 August 2017

page(s)

1029-1041

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Primate CpG islands are maintained by heterogeneous evolutionary regimes involving minimal selection

8 August 2017

cites work

1 reference

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Epigenetics and the origins of paternal effects

27 July 2018

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The impact of CpG island on defining transcriptional activation of the mouse L1 retrotransposable elements

27 July 2018

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The Dnmt3a PWWP domain reads histone 3 lysine 36 trimethylation and guides DNA methylation

27 July 2018

1 reference

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Chromatin and sequence features that define the fine and gross structure of genomic methylation patterns.

27 July 2018

1 reference

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Genome-wide evolutionary analysis of eukaryotic DNA methylation.

27 July 2018

1 reference

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Chromatin methylation activity of Dnmt3a and Dnmt3a/3L is guided by interaction of the ADD domain with the histone H3 tail

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Genome-wide erasure of DNA methylation in mouse primordial germ cells is affected by AID deficiency.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts

27 July 2018

1 reference

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Human DNA methylomes at base resolution show widespread epigenomic differences

27 July 2018

1 reference

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Updates to the RMAP short-read mapping software

27 July 2018

1 reference

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5'-Transducing SVA retrotransposon groups spread efficiently throughout the human genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Distinctive chromatin in human sperm packages genes for embryo development

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Developmental programming of CpG island methylation profiles in the human genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Small RNA silencing pathways in germ and stem cells

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Epigenetic specification of centromeres

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

KDM2A represses transcription of centromeric satellite repeats and maintains the heterochromatic state

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Retrotransposons Revisited: The Restraint and Rehabilitation of Parasites

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Cohesins functionally associate with CTCF on mammalian chromosome arms

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

A novel CpG island set identifies tissue-specific methylation at developmental gene loci

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Epigenetic events in mammalian germ-cell development: reprogramming and beyond

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

DNMT3L connects unmethylated lysine 4 of histone H3 to de novo methylation of DNA

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Insulators: exploiting transcriptional and epigenetic mechanisms

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Recently mobilized transposons in the human and chimpanzee genomes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Large-scale structure of genomic methylation patterns

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Molecular evolution and tempo of amplification of human LINE-1 retrotransposons since the origin of primates.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Initial sequence of the chimpanzee genome and comparison with the human genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Meiotic catastrophe and retrotransposon reactivation in male germ cells lacking Dnmt3L

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Initial sequencing and analysis of the human genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

DNA methyltransferases Dnmt3a and Dnmt3b are essential for de novo methylation and mammalian development

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Transcription of IAP endogenous retroviruses is constrained by cytosine methylation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Cytosine methylation and the unequal developmental potentials of the oocyte and sperm genomes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

DNA methylation in the Alu sequences of diploid and haploid primary human cells

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Structure and genetics of the partially duplicated gene RP located immediately upstream of the complement C4A and the C4B genes in the HLA class III region. Molecular cloning, exon-intron structure, composite retroposon, and breakpoint of gene dupli

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Alu transcripts: cytoplasmic localisation and regulation by DNA methylation

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

CpG islands in vertebrate genomes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Cytosine methylation and the fate of CpG dinucleotides in vertebrate genomes.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Spontaneous deamination of cytosine and 5-methylcytosine residues in DNA and replacement of 5-methylcytosine residues with cytosine residues

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Human Alu subfamilies and their methylation revealed by blot hybridization

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Targeted mutation of the DNA methyltransferase gene results in embryonic lethality

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

A strand-specific burst in transcription of pericentric satellites is required for chromocenter formation and early mouse development

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Integrating common and rare genetic variation in diverse human populations

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Mitotic bookmarking of genes: a novel dimension to epigenetic control.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

CpG islands influence chromatin structure via the CpG-binding protein Cfp1.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Novel family of human transposable elements formed due to fusion of the first exon of gene MAST2 with retrotransposon SVA.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Centromeric DNA hypomethylation as an epigenetic signature discriminates between germ and somatic cell lineages

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

SVA elements: a hominid-specific retroposon family

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

The long terminal repeat (LTR) of ERV-9 human endogenous retrovirus binds to NF-Y in the assembly of an active LTR enhancer complex NF-Y/MZF1/GATA-2.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Differences in DNA methylation patterns between humans and chimpanzees.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

SVA elements are nonautonomous retrotransposons that cause disease in humans

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Specific Alu Binding Protein from Human Sperm Chromatin Prevents DNA Methylation

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3205962

Mitochondria and the death of oocytes

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21925323

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Mutagenic deamination of cytosine residues in DNA

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21925323

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.CELL.2011.08.016

1 reference

8 August 2017

1 reference

8 August 2017

1 reference