Conserved microstructure of the Brassica B Genome of Brassica nigra in relation to homologous regions of Arabidopsis thaliana, B. rapa and B. oleracea (Q34668559)

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English	Conserved microstructure of the Brassica B Genome of Brassica nigra in relation to homologous regions of Arabidopsis thaliana, B. rapa and B. oleracea	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

3 August 2017

Conserved microstructure of the Brassica B Genome of Brassica nigra in relation to homologous regions of Arabidopsis thaliana, B. rapa and B. oleracea (English)

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Arabidopsis thaliana

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1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

object named as

Brassica nigra

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based on heuristic

inferred from title

Brassica oleracea

object named as

B. oleracea

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based on heuristic

inferred from title

5

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Europe PubMed Central

PubMed publication ID

3 August 2017

author name string

Zahra-Katy Navabi

1

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Terry Huebert

2

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Andrew G Sharpe

3

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Carmel M O'Neill

4

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Isobel A P Parkin

6

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

language of work or name

0 references

publication date

15 April 2013

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Europe PubMed Central

PubMed publication ID

3 August 2017

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

14

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Europe PubMed Central

PubMed publication ID

3 August 2017

250

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Europe PubMed Central

PubMed publication ID

3 August 2017

describes a project that uses

object named as

MUMmer

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

Dendroscope 3: an interactive tool for rooted phylogenetic trees and networks

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7 July 2018

Fractionation mutagenesis and similar consequences of mechanisms removing dispensable or less-expressed DNA in plants

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Altered patterns of fractionation and exon deletions in Brassica rapa support a two-step model of paleohexaploidy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

The genome of the mesopolyploid crop species Brassica rapa

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Analysis of B-genome chromosome introgression in interspecific hybrids of Brassica napus × B. carinata

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

FastTree 2--approximately maximum-likelihood trees for large alignments

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Complexity of genome evolution by segmental rearrangement in Brassica rapa revealed by sequence-level analysis

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Comparative analysis between homoeologous genome segments of Brassica napus and its progenitor species reveals extensive sequence-level divergence

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Bias in plant gene content following different sorts of duplication: tandem, whole-genome, segmental, or by transposition

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7 July 2018

Chromosomal phylogeny and karyotype evolution in x=7 crucifer species (Brassicaceae).

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The first generation of a BAC-based physical map of Brassica rapa

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes

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Phyutility: a phyloinformatics tool for trees, alignments and molecular data

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PAML 4: phylogenetic analysis by maximum likelihood

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The ABC's of comparative genomics in the Brassicaceae: building blocks of crucifer genomes.

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GenoProfiler: batch processing of high-throughput capillary fingerprinting data

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7 July 2018

Mapping PrBn and other quantitative trait loci responsible for the control of homeologous chromosome pairing in oilseed rape (Brassica napus L.) haploids

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7 July 2018

Molecular characterization of Ph1 as a major chromosome pairing locus in polyploid wheat

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7 July 2018

Physical mapping and microsynteny of Brassica rapa ssp. pekinensis genome corresponding to a 222 kbp gene-rich region of Arabidopsis chromosome 4 and partially duplicated on chromosome 5.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Whole-genome validation of high-information-content fingerprinting

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Chromosome triplication found across the tribe Brassiceae.

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Evolution of genome size in Brassicaceae

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Conservation of the microstructure of genome segments in Brassica napus and its diploid relatives

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Versatile and open software for comparing large genomes

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

High-throughput fingerprinting of bacterial artificial chromosomes using the snapshot labeling kit and sizing of restriction fragments by capillary electrophoresis

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

PrBn, a major gene controlling homeologous pairing in oilseed rape (Brassica napus) haploids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae)

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Comparative physical mapping of segments of the genome of Brassica oleracea var. alboglabra that are homoeologous to sequenced regions of chromosomes 4 and 5 of Arabidopsis thaliana

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3765694

7 July 2018

Insights into the structural and functional evolution of plant genomes afforded by the nucleotide sequences of chromosomes 2 and 4 of Arabidopsis thaliana

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7 July 2018

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

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7 July 2018

A generalized least-squares estimate for the origin of sporophytic self-incompatibility

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Genomic sequencing

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7 July 2018

Characterization of Brassica nigra collections using simple sequence repeat markers reveals distinct groups associated with geographical location, and frequent mislabelling of species identity.

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https://api.crossref.org/works/10.1186%2F1471-2164-14-250

21 January 2018

Pairing and recombination at meiosis of Brassica rapa (AA) x Brassica napus (AACC) hybrids.

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https://api.crossref.org/works/10.1186%2F1471-2164-14-250

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Introgression of B-genome chromosomes in a doubled haploid population ofBrassica napus ×B. carinata

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https://api.crossref.org/works/10.1186%2F1471-2164-14-250

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Repeated polyploidy drove different levels of crossover suppression between homoeologous chromosomes in Brassica napus allohaploids.

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https://api.crossref.org/works/10.1186%2F1471-2164-14-250

21 January 2018

Rates of nucleotide substitution in angiosperm mitochondrial DNA sequences and dates of divergence between Brassica and other angiosperm lineages

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https://api.crossref.org/works/10.1186%2F1471-2164-14-250

21 January 2018

Sequence-level analysis of the diploidization process in the triplicated FLOWERING LOCUS C region of Brassica rapa

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https://api.crossref.org/works/10.1186%2F1471-2164-14-250

21 January 2018

RGA- and RAPD-derived SCAR markers for a Brassica B-genome introgression conferring resistance to blackleg in oilseed rape.

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https://api.crossref.org/works/10.1186%2F1471-2164-14-250

21 January 2018

TigrScan and GlimmerHMM: two open source ab initio eukaryotic gene-finders.

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https://api.crossref.org/works/10.1186%2F1471-2164-14-250

21 January 2018

Comparative genomics of Brassica oleracea and Arabidopsis thaliana reveal gene loss, fragmentation, and dispersal after polyploidy

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https://api.crossref.org/works/10.1186%2F1471-2164-14-250

21 January 2018

Transfer of resistance against Phoma lingam to Brassica napus by asymmetric somatic hybridization combined with toxin selection.

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26 October 2018

Genome structure affects the rate of autosyndesis and allosyndesis in AABC, BBAC and CCAB Brassica interspecific hybrids.

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26 October 2018

Brassicaceae phylogeny and trichome evolution

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21 January 2018

A comparative linkage map of oilseed rape and its use for QTL analysis of seed oil and erucic acid content

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Genetic regulation of meiotic cross-overs between related genomes in Brassica napus haploids and hybrids

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Alignment of the conserved C genomes of Brassica oleracea and Brassica napus

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https://pubmed.ncbi.nlm.nih.gov/23586706

12 December 2020

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Frequent nonreciprocal translocations in the amphidiploid genome of oilseed rape (Brassica napus)

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https://pubmed.ncbi.nlm.nih.gov/23586706

12 December 2020

based on heuristic

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Characterization of disomic addition lines Brassica napus-Brassica nigra by isozyme, fatty acid, and RFLP markers

1 reference

https://pubmed.ncbi.nlm.nih.gov/23586706

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genotypic effects on the frequency of homoeologous and homologous recombination in Brassica napus × B. carinata hybrids

1 reference

https://pubmed.ncbi.nlm.nih.gov/23586706

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of the A and C genomes of amphidiploid Brassica napus (oilseed rape)

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https://pubmed.ncbi.nlm.nih.gov/23586706

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Amphidiploid Brassica juncea contains conserved progenitor genomes

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https://pubmed.ncbi.nlm.nih.gov/23586706

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic control of oil content in oilseed rape (Brassica napus L.).

1 reference

https://pubmed.ncbi.nlm.nih.gov/23586706

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The reference genetic linkage map for the multinational Brassica rapa genome sequencing project

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https://pubmed.ncbi.nlm.nih.gov/23586706

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tracing B-genome chromatin in Brassica napus x B. juncea interspecific progeny

1 reference

https://pubmed.ncbi.nlm.nih.gov/23586706

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogenetic analysis of Brassiceae based on the nucleotide sequences of the S-locus related gene, SLR1

1 reference

https://pubmed.ncbi.nlm.nih.gov/23586706

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1186/1471-2164-14-250

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

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0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

ResearchGate publication ID

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