Development of a high density 600K SNP genotyping array for chicken (Q34565503)

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22 February 2020

title

Development of a high density 600K SNP genotyping array for chicken (English)

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22 February 2020

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22 February 2020

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22 February 2020

Janet Fulton

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22 February 2020

Andreas Kranis

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22 February 2020

Almas A Gheyas

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22 February 2020

Frances Turner

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22 February 2020

Le Yu

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22 February 2020

Sarah Smith

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22 February 2020

Richard Talbot

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22 February 2020

Ali Pirani

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22 February 2020

Fiona Brew

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22 February 2020

Pete Kaiser

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22 February 2020

Paul M Hocking

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22 February 2020

Mark Fife

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22 February 2020

Nigel Salmon

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22 February 2020

Tim M Strom

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22 February 2020

Georg Haberer

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22 February 2020

Steffen Weigend

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22 February 2020

Rudolf Preisinger

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22 February 2020

Mahmood Gholami

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22 February 2020

Saber Qanbari

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Henner Simianer

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Kellie A Watson

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22 February 2020

John A Woolliams

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22 February 2020

language of work or name

English

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publication date

28 January 2013

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22 February 2020

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volume

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page(s)

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Signatures of selection in the genomes of commercial and non-commercial chicken breeds

22 February 2020

cites work

1 reference

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Hot topic: performance of bovine high-density genotyping platforms in Holsteins and Jerseys

7 July 2018

1 reference

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Exome sequencing: the expert view

7 July 2018

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How selective sweeps in domestic animals provide new insight into biological mechanisms

7 July 2018

1 reference

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The development and characterization of a 60K SNP chip for chicken.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

Linkage disequilibrium reveals different demographic history in egg laying chickens

7 July 2018

1 reference

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Integrative mapping analysis of chicken microchromosome 16 organization

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

A map of human genome variation from population-scale sequencing

7 July 2018

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ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data

7 July 2018

1 reference

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Whole-genome resequencing reveals loci under selection during chicken domestication

7 July 2018

1 reference

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Comparison of linkage disequilibrium and haplotype diversity on macro- and microchromosomes in chicken

7 July 2018

1 reference

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De novo assembly of human genomes with massively parallel short read sequencing

7 July 2018

1 reference

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Genetic diagnosis by whole exome capture and massively parallel DNA sequencing

7 July 2018

1 reference

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Extent and consistency of linkage disequilibrium and identification of DNA markers for production and egg quality traits in commercial layer chicken populations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

The Sequence Alignment/Map format and SAMtools

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

Genetic structure of a wide-spectrum chicken gene pool

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

Fast and accurate short read alignment with Burrows-Wheeler transform

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

A high-density SNP-based linkage map of the chicken genome reveals sequence features correlated with recombination rate

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

Genome-wide assessment of worldwide chicken SNP genetic diversity indicates significant absence of rare alleles in commercial breeds.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

Linkage disequilibrium in related breeding lines of chickens

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

A tutorial on statistical methods for population association studies

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

Reduced variation on the chicken Z chromosome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

Avian genomics in the 21st century

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

Assessing the contribution of breeds to genetic diversity in conservation schemes.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

Extent of linkage disequilibrium in chicken

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3598943

Genetic diversity of Hungarian indigenous chicken breeds based on microsatellite markers

9 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23356797

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-14-59

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22 February 2020

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22 February 2020

PubMed publication ID

23356797

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