Genome-wide analysis of alternative splicing in Caenorhabditis elegans (Q34548324)

2 August 2017

title

Genome-wide analysis of alternative splicing in Caenorhabditis elegans (English)

1 reference

alternative mRNA splicing, via spliceosome

2 August 2017

main subject

Caenorhabditis elegans

0 references

1 reference

Andrew G Fraser

0 references

Quaid Morris

0 references

Benjamin J Blencowe

1 reference

2 August 2017

Arun K Ramani

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2 August 2017

John A Calarco

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2 August 2017

Qun Pan

1 reference

2 August 2017

Sepand Mavandadi

1 reference

2 August 2017

Ying Wang

1 reference

2 August 2017

Andrew C Nelson

1 reference

2 August 2017

Leo J Lee

1 reference

2 August 2017

Mei Zhen

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2 August 2017

publication date

22 December 2010

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2 August 2017

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2 August 2017

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2 August 2017

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2 August 2017

page(s)

342-348

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The landscape of C. elegans 3'UTRs

2 August 2017

cites work

1 reference

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Expansion of the eukaryotic proteome by alternative splicing

7 July 2018

1 reference

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RNA processing and its regulation: global insights into biological networks

7 July 2018

1 reference

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Using the Generic Genome Browser (GBrowse).

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

WormBase: a comprehensive resource for nematode research

7 July 2018

1 reference

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High resolution transcriptome maps for wild-type and nonsense-mediated decay-defective Caenorhabditis elegans

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Regulation of vertebrate nervous system alternative splicing and development by an SR-related protein

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

HRP-2, the Caenorhabditis elegans homolog of mammalian heterogeneous nuclear ribonucleoproteins Q and R, is an alternative splicing factor that binds to UCUAUC splicing regulatory elements

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Decrypting the genome's alternative messages

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Massively parallel sequencing of the polyadenylated transcriptome of C. elegans

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Alternative isoform regulation in human tissue transcriptomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Alternative splicing regulation during C. elegans development: splicing factors as regulated targets

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Splicing regulation: from a parts list of regulatory elements to an integrated splicing code

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

STAR family RNA-binding protein ASD-2 regulates developmental switching of mutually exclusive alternative splicing in vivo

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Alternative splicing in C. elegans

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

The Fox-1 family and SUP-12 coordinately regulate tissue-specific alternative splicing in vivo

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Sex in flies: what 'body--mind' dichotomy?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Alternative splicing: new insights from global analyses

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Intronic alternative splicing regulators identified by comparative genomics in nematodes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Understanding alternative splicing: towards a cellular code

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Splicing regulation in Drosophila sex determination.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

The generic genome browser: a building block for a model organism system database

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Cluster analysis and display of genome-wide expression patterns

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

The genetics of Caenorhabditis elegans

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Transgenic alternative-splicing reporters reveal tissue-specific expression profiles and regulation mechanisms in vivo

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Sex and the single splice.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Alternative splicing of pre-mRNA: developmental consequences and mechanisms of regulation

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3032936

Alternative splicing of conserved exons is frequently species-specific in human and mouse

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21177968

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.114645.110

1 reference

release_gmhesa5rx5culjafditvg2drrm

2 August 2017

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/gmhesa5rx5culjafditvg2drrm

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

3032936

1 reference

2 August 2017

1 reference