Chromosome rearrangements via template switching between diverged repeated sequences (Q34430728)

2 August 2017

title

Chromosome rearrangements via template switching between diverged repeated sequences (English)

1 reference

2 August 2017

Ranjith P Anand

1 reference

2 August 2017

Olga Tsaponina

1 reference

2 August 2017

Patricia W Greenwell

1 reference

2 August 2017

Cheng-Sheng Lee

1 reference

2 August 2017

Wei Du

1 reference

2 August 2017

Thomas D Petes

1 reference

2 August 2017

James E Haber

1 reference

2 August 2017

publication date

1 November 2014

1 reference

2 August 2017

1 reference

2 August 2017

1 reference

2 August 2017

1 reference

2 August 2017

page(s)

2394-2406

1 reference

Frequent Interchromosomal Template Switches during Gene Conversion in S. cerevisiae

2 August 2017

cites work

1 reference

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Template switching during break-induced replication is promoted by the Mph1 helicase in Saccharomyces cerevisiae

6 July 2018

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Break-induced replication repair of damaged forks induces genomic duplications in human cells.

6 July 2018

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Cumulative haploinsufficiency and triplosensitivity drive aneuploidy patterns and shape the cancer genome

6 July 2018

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Migrating bubble during break-induced replication drives conservative DNA synthesis

6 July 2018

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Pif1 helicase and Polδ promote recombination-coupled DNA synthesis via bubble migration.

6 July 2018

1 reference

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Break-induced replication occurs by conservative DNA synthesis

6 July 2018

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Break-induced DNA replication

6 July 2018

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Replicative mechanisms of CNV formation preferentially occur as intrachromosomal events: evidence from Potocki-Lupski duplication syndrome

6 July 2018

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Chromothripsis and cancer: causes and consequences of chromosome shattering

6 July 2018

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Complex reorganization and predominant non-homologous repair following chromosomal breakage in karyotypically balanced germline rearrangements and transgenic integration

6 July 2018

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Chromosome catastrophes involve replication mechanisms generating complex genomic rearrangements

6 July 2018

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A genetic and structural study of genome rearrangements mediated by high copy repeat Ty1 elements

6 July 2018

1 reference

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Break-induced replication is highly inaccurate

6 July 2018

1 reference

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Massive genomic rearrangement acquired in a single catastrophic event during cancer development

6 July 2018

1 reference

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Competitive repair by naturally dispersed repetitive DNA during non-allelic homologous recombination

6 July 2018

1 reference

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Increased mutagenesis and unique mutation signature associated with mitotic gene conversion

6 July 2018

1 reference

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Break-induced replication requires all essential DNA replication factors except those specific for pre-RC assembly.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Genomic instability--an evolving hallmark of cancer

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Chromosomal translocations caused by either pol32-dependent or pol32-independent triparental break-induced replication

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Mechanisms of change in gene copy number

6 July 2018

1 reference

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A microhomology-mediated break-induced replication model for the origin of human copy number variation

6 July 2018

1 reference

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Segmental duplications arise from Pol32-dependent repair of broken forks through two alternative replication-based mechanisms

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Double-strand breaks associated with repetitive DNA can reshape the genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

An oncogene-induced DNA damage model for cancer development

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Genome instability: a mechanistic view of its causes and consequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

A DNA replication mechanism for generating nonrecurrent rearrangements associated with genomic disorders

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Break-induced replication and telomerase-independent telomere maintenance require Pol32.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Genomic rearrangements and sporadic disease

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Inverted DNA repeats channel repair of distant double-strand breaks into chromatid fusions and chromosomal rearrangements

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Control of translocations between highly diverged genes by Sgs1, the Saccharomyces cerevisiae homolog of the Bloom's syndrome protein

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Roles of nonhomologous DNA end joining, V(D)J recombination, and class switch recombination in chromosomal translocations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

RAD51-dependent break-induced replication differs in kinetics and checkpoint responses from RAD51-mediated gene conversion

6 July 2018

1 reference

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Heteroduplex rejection during single-strand annealing requires Sgs1 helicase and mismatch repair proteins Msh2 and Msh6 but not Pms1

6 July 2018

1 reference

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RAD51-dependent break-induced replication in yeast

6 July 2018

1 reference

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In vivo roles of Rad52, Rad54, and Rad55 proteins in Rad51-mediated recombination.

6 July 2018

1 reference

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Double-strand breaks and translocations in cancer

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

RAD51-independent break-induced replication to repair a broken chromosome depends on a distant enhancer site

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Genetic requirements for RAD51- and RAD54-independent break-induced replication repair of a chromosomal double-strand break

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Separation-of-function mutations in Saccharomyces cerevisiae MSH2 that confer mismatch repair defects but do not affect nonhomologous-tail removal during recombination

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Removal of one nonhomologous DNA end during gene conversion by a RAD1- and MSH2-independent pathway

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

RDH54, a RAD54 homologue in Saccharomyces cerevisiae, is required for mitotic diploid-specific recombination and repair and for meiosis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Two Pathways for Removal of Nonhomologous DNA Ends during Double-Strand Break Repair in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

“Break Copy” Duplication: A Model for Chromosome Fragment Formation in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Dual roles for DNA sequence identity and the mismatch repair system in the regulation of mitotic crossing-over in yeast

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Role of Saccharomyces cerevisiae Msh2 and Msh3 repair proteins in double-strand break-induced recombination

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Requirement of mismatch repair genes MSH2 and MSH3 in the RAD1-RAD10 pathway of mitotic recombination in Saccharomyces cerevisiae.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Genetic requirements for the single-strand annealing pathway of double-strand break repair in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Double-strand break repair in the absence of RAD51 in yeast: a possible role for break-induced DNA replication

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Mitotic recombination among subtelomeric Y' repeats in Saccharomyces cerevisiae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Removal of nonhomologous DNA ends in double-strand break recombination: the role of the yeast ultraviolet repair gene RAD1

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Template switching during break-induced replication

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Chromosomal translocations in yeast induced by low levels of DNA polymerase a model for chromosome fragile sites.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

Chromosomal evolution in Saccharomyces

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4215184

DNA replication fork pause sites dependent on transcription

9 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25367035

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Repair of DNA loops involves DNA-mismatch and nucleotide-excision repair proteins

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25367035

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Non-recurrent 17p11.2 deletions are generated by homologous and non-homologous mechanisms

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25367035

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GAD.250258.114

1 reference

2 August 2017

1 reference

2 August 2017

1 reference