Genetic changes during a laboratory adaptive evolution process that allowed fast growth in glucose to an Escherichia coli strain lacking the major glucose transport system (Q34376116)

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English	Genetic changes during a laboratory adaptive evolution process that allowed fast growth in glucose to an Escherichia coli strain lacking the major glucose transport system	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

1 August 2017

Genetic changes during a laboratory adaptive evolution process that allowed fast growth in glucose to an Escherichia coli strain lacking the major glucose transport system (English)

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Europe PubMed Central

PubMed publication ID

1 August 2017

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Escherichia coli

1 reference

based on heuristic

inferred from title

adaptive evolution

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based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

Guillermo Gosset

6

object named as

Guillermo Gosset

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Europe PubMed Central

PubMed publication ID

1 August 2017

author name string

César Aguilar

1

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Europe PubMed Central

PubMed publication ID

1 August 2017

Adelfo Escalante

2

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Europe PubMed Central

PubMed publication ID

1 August 2017

Noemí Flores

3

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Europe PubMed Central

PubMed publication ID

1 August 2017

Ramón de Anda

4

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

Fernando Riveros-McKay

5

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

Enrique Morett

7

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Europe PubMed Central

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1 August 2017

Francisco Bolívar

8

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Europe PubMed Central

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1 August 2017

language of work or name

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publication date

10 August 2012

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Europe PubMed Central

PubMed publication ID

1 August 2017

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Europe PubMed Central

PubMed publication ID

1 August 2017

13

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Europe PubMed Central

PubMed publication ID

1 August 2017

385

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Europe PubMed Central

PubMed publication ID

1 August 2017

Genetic Basis of Growth Adaptation of Escherichia coli after Deletion of pgi, a Major Metabolic Gene

1 reference

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1 reference

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Improving draft assemblies by iterative mapping and assembly of short reads to eliminate gaps

1 reference

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Metabolic engineering for the production of shikimic acid in an evolved Escherichia coli strain lacking the phosphoenolpyruvate: carbohydrate phosphotransferase system

1 reference

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A practical approach to RT-qPCR-Publishing data that conform to the MIQE guidelines

1 reference

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Whole-genome resequencing of Escherichia coli K-12 MG1655 undergoing short-term laboratory evolution in lactate minimal media reveals flexible selection of adaptive mutations

1 reference

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Transcription analysis of central metabolism genes in Escherichia coli. Possible roles of sigma38 in their expression, as a response to carbon limitation

1 reference

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ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data

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6 July 2018

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6 July 2018

Reordering contigs of draft genomes using the Mauve aligner

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The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments

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6 July 2018

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

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Nonspecific base recognition mediated by water bridges and hydrophobic stacking in ribonuclease I fromEscherichia coli

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Coutilization of glucose and glycerol enhances the production of aromatic compounds in an Escherichia coli strain lacking the phosphoenolpyruvate: carbohydrate phosphotransferase system

1 reference

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The bacterial enzyme RppH triggers messenger RNA degradation by 5' pyrophosphate removal.

1 reference

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An evaluation of Comparative Genome Sequencing (CGS) by comparing two previously-sequenced bacterial genomes

1 reference

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Understanding the evolutionary fate of finite populations: the dynamics of mutational effects

1 reference

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Large-scale identification of protein-protein interaction of Escherichia coli K-12

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Identification of a quinone-sensitive redox switch in the ArcB sensor kinase.

1 reference

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6 July 2018

Mauve: multiple alignment of conserved genomic sequence with rearrangements

1 reference

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Evolutionary significance of stress-induced mutagenesis in bacteria

1 reference

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Analysis of gene expression in Escherichia coli in response to changes of growth-limiting nutrient in chemostat cultures

1 reference

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Patatin-like proteins: a new family of lipolytic enzymes present in bacteria?

1 reference

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6 July 2018

Probing the ArcA-P modulon of Escherichia coli by whole genome transcriptional analysis and sequence recognition profiling.

1 reference

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6 July 2018

DNA mismatch repair: molecular mechanisms and biological function

1 reference

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6 July 2018

Experimental Determination and System Level Analysis of Essential Genes in Escherichia coli MG1655

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6 July 2018

Neutral mutations and neutral substitutions in bacterial genomes

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6 July 2018

The Escherichia coli BarA-UvrY two-component system is needed for efficient switching between glycolytic and gluconeogenic carbon sources.

1 reference

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3469383

6 July 2018

BLAT—The BLAST-Like Alignment Tool

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3469383

6 July 2018

Structure of the bacterial RNA polymerase promoter specificity sigma subunit

1 reference

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Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

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6 July 2018

A functional update of the Escherichia coli K-12 genome

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RpoS-dependent transcriptional control of sprE: regulatory feedback loop

1 reference

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One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

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6 July 2018

The complete genome sequence of Escherichia coli K-12

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Comparative genome sequencing of Escherichia coli allows observation of bacterial evolution on a laboratory timescale

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21 January 2018

Pathway engineering for the production of aromatic compounds in Escherichia coli

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https://api.crossref.org/works/10.1186%2F1471-2164-13-385

21 January 2018

Role of pyruvate oxidase in Escherichia coli strains lacking the phosphoenolpyruvate:carbohydrate phosphotransferase system

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https://api.crossref.org/works/10.1186%2F1471-2164-13-385

21 January 2018

Growth recovery on glucose under aerobic conditions of an Escherichia coli strain carrying a phosphoenolpyruvate:carbohydrate phosphotransferase system deletion by inactivating arcA and overexpressing the genes coding for glucokinase and galactose p

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-385

21 January 2018

New insights into the role of sigma factor RpoS as revealed in escherichia coli strains lacking the phosphoenolpyruvate:carbohydrate phosphotransferase system.

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21 January 2018

Nutrient-scavenging stress response in an Escherichia coli strain lacking the phosphoenolpyruvate: carbohydrate phosphotransferase system, as explored by gene expression profile analysis

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21 January 2018

Determination of 3-deoxy-D-arabino-heptulosonate 7-phosphate productivity and yield from glucose in Escherichia coli devoid of the glucose phosphotransferase transport system

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Scalable method to determine mutations that occur during adaptive evolution of Escherichia coli

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In vitro and in vivo studies of MutS, MutL and MutH mutants: correlation of mismatch repair and DNA recombination.

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21 January 2018

Stress-induced mutagenesis in bacteria

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21 January 2018

Adaptation for fast growth on glucose by differential expression of central carbon metabolism and gal regulon genes in an Escherichia coli strain lacking the phosphoenolpyruvate:carbohydrate phosphotransferase system

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PE-Assembler: de novo assembler using short paired-end reads

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12 December 2020

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10.1186/1471-2164-13-385

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

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