Diffusion of solvent around biomolecular solutes: a molecular dynamics simulation study (Q34168326)

31 July 2017

title

Diffusion of solvent around biomolecular solutes: a molecular dynamics simulation study (English)

1 reference

31 July 2017

Makarov VA

1 reference

31 July 2017

Feig M

series ordinal

1 reference

31 July 2017

Andrews BK

series ordinal

1 reference

31 July 2017

Pettitt BM

series ordinal

1 reference

31 July 2017

language of work or name

English

0 references

publication date

1 July 1998

1 reference

31 July 2017

1 reference

31 July 2017

1 reference

31 July 2017

1 reference

31 July 2017

page(s)

150-158

1 reference

Direct observation of protein solvation and discrete disorder with experimental crystallographic phases

31 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

Incorporation of surface tension into molecular dynamics simulation of an interface: a fluid phase lipid bilayer membrane

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

A molecular dynamics study of solvent behavior around a protein.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

High-resolution crystal structures of distal histidine mutants of sperm whale myoglobin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

A global model of the protein-solvent interface

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

Molecular dynamics simulations of an enzyme surrounded by vacuum, water, or a hydrophobic solvent

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

Structure and dynamics of the water around myoglobin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

Hydration of proteins. A comparison of experimental residence times of water molecules solvating the bovine pancreatic trypsin inhibitor with theoretical model calculations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

Ion transport in the gramicidin channel: molecular dynamics study of single and double occupancy

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

Structural chemistry of biomolecular hydration via computer simulation: the proximity criterion.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

Accurate simulation of protein dynamics in solution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

Water-protein interactions: theory and experiment

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

Calcium, tropomyosin, and actomyosin as controls of calcium binding by troponin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

The Protein Data Bank: a computer-based archival file for macromolecular structures

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

Protein hydration observed by X-ray diffraction. Solvation properties of penicillopepsin and neuraminidase crystal structures.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1299687

The influence of a protein on water dynamics in its vicinity investigated by molecular dynamics simulation

28 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977502-2

Characterizing global substates of myoglobin

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977502-2

Molecular dynamics simulation evidence of anomalous diffusion of protein hydration water

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977502-2

Solvent effects on protein motion and protein effects on solvent motion. Dynamics of the active site region of lysozyme

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977502-2

A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977502-2

Comparison of simple potential functions for simulating liquid water

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977502-2

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2898%2977502-2

10.1016/S0006-3495(98)77502-2

7 January 2021

Identifiers

DOI

1 reference

31 July 2017

1 reference

31 July 2017

1 reference