CRISPR-Cas immunity in prokaryotes (Q34045076)

30 July 2017

title

CRISPR-Cas immunity in prokaryotes (English)

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30 July 2017

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Luciano A Marraffini

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30 July 2017

language of work or name

English

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publication date

1 October 2015

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30 July 2017

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30 July 2017

volume

526

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30 July 2017

issue

7571

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30 July 2017

page(s)

55-61

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High abundance of viruses found in aquatic environments.

30 July 2017

cites work

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Phage-host interaction: an ecological perspective

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

AN INVESTIGATION ON THE NATURE OF ULTRA-MICROSCOPIC VIRUSES.

21 January 2018

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https://api.crossref.org/works/10.1038%2FNATURE15386

STUDIES ON THE D'HERELLE PHENOMENON.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Virus population dynamics and acquired virus resistance in natural microbial communities

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Phage response to CRISPR-encoded resistance in Streptococcus thermophilus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR-induced distributed immunity in microbial populations.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR immunity drives rapid phage genome evolution in Streptococcus thermophilus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Persisting viral sequences shape microbial CRISPR-based immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Nucleotide sequence of the iap gene, responsible for alkaline phosphatase isozyme conversion in Escherichia coli, and identification of the gene product

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Biological significance of a family of regularly spaced repeats in the genomes of Archaea, Bacteria and mitochondria.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Identification of genes that are associated with DNA repeats in prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Small CRISPR RNAs guide antiviral defense in prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Evolution and classification of the CRISPR-Cas systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Sequence- and Structure-Specific RNA Processing by a CRISPR Endonuclease

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Structural basis for CRISPR RNA-guided DNA recognition by Cascade

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Mechanism of Foreign DNA Selection in a Bacterial Adaptive Immune System

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Diversity, activity, and evolution of CRISPR loci in Streptococcus thermophilus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Short motif sequences determine the targets of the prokaryotic CRISPR defence system

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Interference by clustered regularly interspaced short palindromic repeat (CRISPR) RNA is governed by a seed sequence

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

In vitro reconstitution of Cascade-mediated CRISPR immunity in Streptococcus thermophilus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR immunity relies on the consecutive binding and degradation of negatively supercoiled invader DNA by Cascade and Cas3

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Two distinct DNA binding modes guide dual roles of a CRISPR-Cas protein complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Direct observation of R-loop formation by single RNA-guided Cas9 and Cascade effector complexes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Structural biology. Crystal structure of the CRISPR RNA-guided surveillance complex from Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Structural biology. Crystal structure of a CRISPR RNA-guided surveillance complex bound to a ssDNA target

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Crystal structure of the RNA-guided immune surveillance Cascade complex in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CasA mediates Cas3-catalyzed target degradation during CRISPR RNA-guided interference

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Structures of CRISPR Cas3 offer mechanistic insights into Cascade-activated DNA unwinding and degradation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

In vitro reconstitution of an Escherichia coli RNA-guided immune system reveals unidirectional, ATP-dependent degradation of DNA target

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Cas3 is a single-stranded DNA nuclease and ATP-dependent helicase in the CRISPR/Cas immune system

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

The Streptococcus thermophilus CRISPR/Cas system provides immunity in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Structural basis of PAM-dependent target DNA recognition by the Cas9 endonuclease

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Structures of Cas9 Endonucleases Reveal RNA-Mediated Conformational Activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Crystal Structure of Cas9 in Complex with Guide RNA and Target DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

A Programmable Dual-RNA-Guided DNA Endonuclease in Adaptive Bacterial Immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

DNA interrogation by the CRISPR RNA-guided endonuclease Cas9.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

RNA-guided editing of bacterial genomes using CRISPR-Cas systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Cas6 is an endoribonuclease that generates guide RNAs for invader defense in prokaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Self versus non-self discrimination during CRISPR RNA-directed immunity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Cas6 specificity and CRISPR RNA loading in a complex CRISPR-Cas system

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Prokaryotic silencing (psi)RNAs in Pyrococcus furiosus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Mature clustered, regularly interspaced, short palindromic repeats RNA (crRNA) length is measured by a ruler mechanism anchored at the precursor processing site

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

A ruler protein in a complex for antiviral defense determines the length of small interfering CRISPR RNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

A novel interference mechanism by a type IIIB CRISPR-Cmr module in Sulfolobus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Conditional tolerance of temperate phages via transcription-dependent CRISPR-Cas targeting

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Co-transcriptional DNA and RNA Cleavage during Type III CRISPR-Cas Immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

RNA targeting by the type III-A CRISPR-Cas Csm complex of Thermus thermophilus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Programmable RNA shredding by the type III-A CRISPR-Cas system of Streptococcus thermophilus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR-mediated targeted mRNA degradation in the archaeon Sulfolobus solfataricus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Structure and Mechanism of the CMR Complex for CRISPR-Mediated Antiviral Immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

An archaeal CRISPR type III-B system exhibiting distinctive RNA targeting features and mediating dual RNA and DNA interference.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Proteins and DNA elements essential for the CRISPR adaptation process in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR-Cas9-assisted recombineering in Lactobacillus reuteri

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Multigene editing in the Escherichia coli genome via the CRISPR-Cas9 system

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

One-step high-efficiency CRISPR/Cas9-mediated genome editing in Streptomyces

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Exploiting CRISPR-Cas nucleases to produce sequence-specific antimicrobials

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Sequence-specific antimicrobials using efficiently delivered RNA-guided nucleases.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Programmable removal of bacterial strains by use of genome-targeting CRISPR-Cas systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR-spacer integration reporter plasmids reveal distinct genuine acquisition specificities among CRISPR-Cas I-E variants of Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Cas1–Cas2 complex formation mediates spacer acquisition during CRISPR–Cas adaptive immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR adaptation biases explain preference for acquisition of foreign DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Replication termination in Escherichia coli: structure and antihelicase activity of the Tus-Ter complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

RecBCD enzyme and the repair of double-stranded DNA breaks

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

How RecBCD enzyme and Chi promote DNA break repair and recombination: a molecular biologist's view

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Cas9 specifies functional viral targets during CRISPR-Cas adaptation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Cas9 function and host genome sampling in Type II-A CRISPR-Cas adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Molecular memory of prior infections activates the CRISPR/Cas adaptive bacterial immunity system

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR interference directs strand specific spacer acquisition

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Experimental definition of a clustered regularly interspaced short palindromic duplicon in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

High-throughput analysis of type I-E CRISPR/Cas spacer acquisition in E. coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Pervasive generation of oppositely oriented spacers during CRISPR adaptation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Detection and characterization of spacer integration intermediates in type I-E CRISPR-Cas system

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Integrase-mediated spacer acquisition during CRISPR-Cas adaptive immunity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Mechanisms of, and barriers to, horizontal gene transfer between bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR interference can prevent natural transformation and virulence acquisition during in vivo bacterial infection.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Processing-independent CRISPR RNAs limit natural transformation in Neisseria meningitidis

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Dealing with the evolutionary downside of CRISPR immunity: bacteria and beneficial plasmids

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

CRISPR-Cas immunity against phages: its effects on the evolution and survival of bacterial pathogens

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

No evidence of inhibition of horizontal gene transfer by CRISPR-Cas on evolutionary timescales

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

The basic building blocks and evolution of CRISPR-CAS systems

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Bacteriophage genes that inactivate the CRISPR/Cas bacterial immune system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

A CRISPR/Cas system mediates bacterial innate immune evasion and virulence

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Erratum: Corrigendum: A CRISPR/Cas system mediates bacterial innate immune evasion and virulence

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Essential features and rational design of CRISPR RNAs that function with the Cas RAMP module complex to cleave RNAs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Reverse transcriptase-mediated tropism switching in Bordetella bacteriophage

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Reduction in exopolysaccharide viscosity as an aid to bacteriophage penetration through Pseudomonas aeruginosa biofilms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Superinfection exclusion by T-even-type coliphages

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

An Escherichia coli chromosomal "addiction module" regulated by guanosine [corrected] 3',5'-bispyrophosphate: a model for programmed bacterial cell death

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

The phage abortive infection system, ToxIN, functions as a protein-RNA toxin-antitoxin pair

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

BREX is a novel phage resistance system widespread in microbial genomes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Bacterial argonaute samples the transcriptome to identify foreign DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

DNA-guided DNA interference by a prokaryotic Argonaute

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Bacteriophage resistance mechanisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Tropism switching in Bordetella bacteriophage defines a family of diversity-generating retroelements

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

The interaction of phage and biofilms

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE15386

Characteristics of Chi distribution on different bacterial genomes

21 January 2018

1 reference

12 December 2020

Host-parasite interactions: recent developments in the genetics of abortive phage infections

1 reference

12 December 2020

Directional R-Loop Formation by the CRISPR-Cas Surveillance Complex Cascade Provides Efficient Off-Target Site Rejection.

1 reference

12 December 2020

The Rex system of bacteriophage lambda: tolerance and altruistic cell death

1 reference

12 December 2020

Mutations of Bacteria from Virus Sensitivity to Virus Resistance

1 reference

12 December 2020

The role of Dam methylation in phase variation of Haemophilus influenzae genes involved in defence against phage infection

1 reference

12 December 2020

Biology of DNA restriction

1 reference

12 December 2020

The major head protein of bacteriophage T4 binds specifically to elongation factor Tu

1 reference

12 December 2020

Identifiers

DOI

10.1038/NATURE15386

1 reference

30 July 2017

1 reference