A data processing pipeline for mammalian proteome dynamics studies using stable isotope metabolic labeling (Q34027176)

30 July 2017

title

A data processing pipeline for mammalian proteome dynamics studies using stable isotope metabolic labeling (English)

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30 July 2017

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Sina Ghaemmaghami

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Stanley B Prusiner

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30 July 2017

Shenheng Guan

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30 July 2017

John C Price

series ordinal

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30 July 2017

Alma L Burlingame

series ordinal

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30 July 2017

publication date

21 September 2011

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Molecular & Cellular Proteomics

30 July 2017

published in

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30 July 2017

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30 July 2017

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30 July 2017

page(s)

M111.010728

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describes a project that uses

30 July 2017

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The many faces of tau

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

Analysis of proteome dynamics in the mouse brain

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

Quantitative proteomics by metabolic labeling of model organisms

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

Measuring proteome dynamics in vivo: as easy as adding water?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

QuantiSpec--Quantitative mass spectrometry data analysis of (15)N-metabolically labeled proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

Turnover of the human proteome: determination of protein intracellular stability by dynamic SILAC.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

An assessment of software solutions for the analysis of mass spectrometry based quantitative proteomics data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

15N metabolic labeling of mammalian tissue with slow protein turnover

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

The Absorption and Translocation of Lead by Plants: A Contribution to the Application of the Method of Radioactive Indicators in the Investigation of the Change of Substance in Plants

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

The dynamics of the proteome: strategies for measuring protein turnover on a proteome-wide scale

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

Mass isotopomer distribution analysis at eight years: theoretical, analytic, and experimental considerations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

Ultrahigh-Speed Calculation of Isotope Distributions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

Proteome scale turnover analysis in live animals using stable isotope metabolic labeling.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

SILAC mouse for quantitative proteomics uncovers kindlin-3 as an essential factor for red blood cell function

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

THE APPLICATION OF THE NITROGEN ISOTOPE N15 FOR THE STUDY OF PROTEIN METABOLISM.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

A new algorithm using cross-assignment for label-free quantitation with LC-LTQ-FT MS.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

Metabolic labeling of mammalian organisms with stable isotopes for quantitative proteomic analysis

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

Quantification of proteins and metabolites by mass spectrometry without isotopic labeling or spiked standards

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3237081

Measurement of the isotope enrichment of stable isotope-labeled proteins using high-resolution mass spectra of peptides

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21937731

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

DEUTERIUM AS AN INDICATOR IN THE STUDY OF INTERMEDIARY METABOLISM

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21937731

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/MCP.M111.010728

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30 July 2017

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30 July 2017

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