Evaluating microarray-based classifiers: an overview (Q28761774)

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22 January 2020

review article

1 reference

title

Evaluating microarray-based classifiers: an overview (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19259405%20AND%20SRC:MED&resulttype=core&format=json

22 January 2020

A-L Boulesteix

1 reference

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22 January 2020

C Strobl

series ordinal

1 reference

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22 January 2020

T Augustin

series ordinal

1 reference

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22 January 2020

M Daumer

series ordinal

1 reference

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22 January 2020

language of work or name

English

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publication date

29 February 2008

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22 January 2020

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22 January 2020

volume

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22 January 2020

page(s)

77-97

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Reducing the probability of false positive research findings by pre-publication validation - experience with a large multiple sclerosis database

22 January 2020

cites work

1 reference

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Key aspects of analyzing microarray gene-expression data

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16 March 2017

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16 March 2017

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7 April 2017

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7 April 2017

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3 June 2018

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3 June 2018

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Critical review of published microarray studies for cancer outcome and guidelines on statistical analysis and reporting

3 June 2018

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3 June 2018

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Reader's reaction to "Dimension reduction for classification with gene expression microarray data" by Dai et al (2006).

3 June 2018

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Validation and clinical utility of a 70-gene prognostic signature for women with node-negative breast cancer

3 June 2018

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Comparison and evaluation of methods for generating differentially expressed gene lists from microarray data.

3 June 2018

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Partial least squares: a versatile tool for the analysis of high-dimensional genomic data

3 June 2018

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Machine learning in bioinformatics

3 June 2018

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Error distribution for gene expression data.

3 June 2018

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PLS dimension reduction for classification with microarray data

3 June 2018

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Improved variance estimation of classification performance via reduction of bias caused by small sample size

3 June 2018

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Robust classification modeling on microarray data using misclassification penalized posterior

3 June 2018

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Prediction error estimation: a comparison of resampling methods

3 June 2018

1 reference

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Classification of a large microarray data set: algorithm comparison and analysis of drug signatures

3 June 2018

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MADE4: an R package for multivariate analysis of gene expression data

3 June 2018

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Effectiveness of gene expression profiling for response prediction of rectal adenocarcinomas to preoperative chemoradiotherapy.

3 June 2018

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Evaluating methods for classifying expression data

3 June 2018

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Classification using partial least squares with penalized logistic regression

3 June 2018

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BagBoosting for tumor classification with gene expression data

3 June 2018

1 reference

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Developing optimal prediction models for cancer classification using gene expression data

3 June 2018

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Penalized discriminant methods for the classification of tumors from gene expression data

3 June 2018

1 reference

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Predictive ability of DNA microarrays for cancer outcomes and correlates: an empirical assessment

3 June 2018

1 reference

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Reliable diagnoses of dementia by the naive credal classifier inferred from incomplete cognitive data.

3 June 2018

1 reference

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Gene selection in microarray data: the elephant, the blind men and our algorithms

3 June 2018

1 reference

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Boosting for tumor classification with gene expression data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623308

Pitfalls in the use of DNA microarray data for diagnostic and prognostic classification

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623308

Genetic algorithms applied to multi-class prediction for the analysis of gene expression data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623308

Nonparametric methods for identifying differentially expressed genes in microarray data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623308

Selection bias in gene extraction on the basis of microarray gene-expression data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623308

Tumor classification by partial least squares using microarray gene expression data

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623308

What do we mean by validating a prognostic model?

3 June 2018

1 reference

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Probabilistic prediction in patient management and clinical trials

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623308

Adapting prediction error estimates for biased complexity selection in high-dimensional bootstrap samples

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2623308

Efron-type measures of prediction error for survival analysis

27 November 2018

1 reference

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Accurate ranking of differentially expressed genes by a distribution-free shrinkage approach.

27 November 2018

1 reference

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A compendium to ensure computational reproducibility in high-dimensional classification tasks.

27 November 2018

1 reference

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Regularized linear discriminant analysis and its application in microarrays

27 November 2018

1 reference

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Avoiding model selection bias in small-sample genomic datasets

27 November 2018

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Bayesian error-in-variable survival model for the analysis of GeneChip arrays.

27 November 2018

1 reference

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Estimating misclassification error with small samples via bootstrap cross-validation

27 November 2018

1 reference

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A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis.

27 November 2018

1 reference

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Is cross-validation valid for small-sample microarray classification?

27 November 2018

1 reference

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Pattern recognition in gene expression profiling using DNA array: a comparative study of different statistical methods applied to cancer classification

27 November 2018

1 reference

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A model for measurement error for gene expression arrays

27 November 2018

1 reference

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Tissue classification with gene expression profiles.

27 November 2018

1 reference

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Efficient confidence bounds for ROC curves

27 November 2018

1 reference

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Development and validation of therapeutically relevant multi-gene biomarker classifiers

27 November 2018

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12 December 2020

Microarray-based prediction of tumor response to neoadjuvant radiochemotherapy of patients with locally advanced rectal cancer

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12 December 2020

Classification of gene microarrays by penalized logistic regression

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12 December 2020

Gene expression profile in multiple sclerosis patients and healthy controls: identifying pathways relevant to disease

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12 December 2020

GALGO: an R package for multivariate variable selection using genetic algorithms

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Microarrays and molecular research: noise discovery?

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12 December 2020

Identifiers

DOI

10.4137/CIN.S408

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19259405%20AND%20SRC:MED&resulttype=core&format=json

22 January 2020

3004888

1 reference

Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

2 references

3004888

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19259405%20AND%20SRC:MED&resulttype=core&format=json

22 January 2020

PubMed publication ID

19259405

2 references

Consolidated OpenCitations Corpus – April 2017

3004888

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19259405%20AND%20SRC:MED&resulttype=core&format=json