Planctomycetes and eukaryotes: a case of analogy not homology (Q28246136)

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English	Planctomycetes and eukaryotes: a case of analogy not homology	scientific article (publication date: November 2011)

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scholarly article

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title

Planctomycetes and eukaryotes: a case of analogy not homology (English)

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author

Eugene Koonin

series ordinal

3

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Michael Y. Galperin

object named as

Michael Y Galperin

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5

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John F Allen

object named as

John F Allen

series ordinal

4

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William F. Martin

object named as

William F Martin

series ordinal

2

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James O. McInerney

series ordinal

1

object named as

James O McInerney

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Martin Embley

series ordinal

8

object named as

T Martin Embley

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author name string

Nick Lane

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6

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John M Archibald

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7

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language of work or name

English

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publication date

November 2011

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published in

BioEssays

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volume

33

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issue

11

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page(s)

810-7

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cites work

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The Planctomycetes, Verrucomicrobia, Chlamydiae and sister phyla comprise a superphylum with biotechnological and medical relevance

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INTRACELLULAR COMPARTMENTATION IN PLANCTOMYCETES

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Archaeal Ubiquitin-Like Proteins: Functional Versatility and Putative Ancestral Involvement in tRNA Modification Revealed by Comparative Genomic Analysis

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Evolution of diverse cell division and vesicle formation systems in Archaea

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Shaping the archaeal cell envelope

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Bacteria with a eukaryotic touch: a glimpse of ancient evolution?

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The compartmentalized bacteria of the planctomycetes-verrucomicrobia-chlamydiae superphylum have membrane coat-like proteins

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29 September 2017

The cell cycle of the planctomycete Gemmata obscuriglobus with respect to cell compartmentalization

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29 September 2017

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29 September 2017

Predation and eukaryote cell origins: a coevolutionary perspective

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29 September 2017

The prokaryotic tree of life: past, present... and future?

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The prokaryotic V4R domain is the likely ancestor of a key component of the eukaryotic vesicle transport system

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29 September 2017

Phylogenetic and metabolic diversity of Planctomycetes from anaerobic, sulfide- and sulfur-rich Zodletone Spring, Oklahoma

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29 September 2017

Cell biology of mitochondrial dynamics

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29 September 2017

Comparative genomics and structural biology of the molecular innovations of eukaryotes

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29 September 2017

Selective forces for the origin of the eukaryotic nucleus

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29 September 2017

Magnetosomes are cell membrane invaginations organized by the actin-like protein MamK.

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29 September 2017

Archaebacteria (Archaea) and the origin of the eukaryotic nucleus.

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29 September 2017

A genome phylogeny for mitochondria among alpha-proteobacteria and a predominantly eubacterial ancestry of yeast nuclear genes.

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29 September 2017

Chlamydial histone-DNA interactions are disrupted by a metabolite in the methylerythritol phosphate pathway of isoprenoid biosynthesis

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29 September 2017

Genes for the cytoskeletal protein tubulin in the bacterial genus Prosthecobacter.

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29 September 2017

Linearly concatenated cyclobutane lipids form a dense bacterial membrane

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29 September 2017

Cell compartmentalisation in planctomycetes: novel types of structural organisation for the bacterial cell

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29 September 2017

Unusual ultrastructural features in three strains of Cyanothece (cyanobacteria).

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29 September 2017

Genomic evidence for two functionally distinct gene classes.

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29 September 2017

Comparison of archaeal and bacterial genomes: computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea

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29 September 2017

Functional domains of chlamydial histone H1-like protein

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29 September 2017

Diversity in the Chlamydia trachomatis histone homologue Hc2.

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29 September 2017

Evidence for a chimeric nature of nuclear genomes: eubacterial origin of eukaryotic glyceraldehyde-3-phosphate dehydrogenase genes.

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29 September 2017

Was the nucleus the first endosymbiont?

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29 September 2017

Control of gene expression by redox potential and the requirement for chloroplast and mitochondrial genomes

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29 September 2017

Speculations on the early course of evolution

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29 September 2017

Chlamydia trachomatis developmentally regulated protein is homologous to eukaryotic histone H1

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29 September 2017

Protein uptake by bacteria: An endocytosis-like process in the planctomycete Gemmata obscuriglobus

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2 June 2018

Intracellular localization of membrane-bound ATPases in the compartmentalized anammox bacterium 'Candidatus Kuenenia stuttgartiensis'.

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2 June 2018

Whole-genome reciprocal BLAST analysis reveals that planctomycetes do not share an unusually large number of genes with Eukarya and Archaea.

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2 June 2018

The origin of eukaryotes is suggested as the symbiosis of pyrococcus into gamma-proteobacteria by phylogenetic tree based on gene content

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795523

retrieved

2 June 2018

HEAT repeats in the Huntington's disease protein

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795523

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2 June 2018

The cell wall polysaccharide metabolism of the brown alga Ectocarpus siliculosus. Insights into the evolution of extracellular matrix polysaccharides in Eukaryotes

1 reference

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reference URL

https://api.crossref.org/works/10.1002%2FBIES.201100045

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21 January 2018

The H(+)-pyrophosphatase of Rhodospirillum rubrum is predominantly located in polyphosphate-rich acidocalcisomes

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1002%2FBIES.201100045

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21 January 2018

A spatial model of the chromatophore vesicles of Rhodobacter sphaeroides and the position of the Cytochrome bc1 complex

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Crossref

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https://api.crossref.org/works/10.1002%2FBIES.201100045

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21 January 2018

Coexistence of tubulins and ftsZ in different Prosthecobacter species

1 reference

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Crossref

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https://api.crossref.org/works/10.1002%2FBIES.201100045

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21 January 2018

The origin of eukaryotes: a reappraisal.

1 reference

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21 January 2018

Deriving the genomic tree of life in the presence of horizontal gene transfer: conditioned reconstruction

1 reference

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Crossref

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https://api.crossref.org/works/10.1002%2FBIES.201100045

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21 January 2018

The Complexity Hypothesis Revisited: Connectivity Rather Than Function Constitutes a Barrier to Horizontal Gene Transfer

1 reference

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Crossref

reference URL

https://api.crossref.org/works/10.1002%2FBIES.201100045

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21 January 2018

A positive definition of prokaryotes

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1002%2FBIES.201100045

retrieved

21 January 2018

Genome Phylogenies Indicate a Meaningful α-Proteobacterial Phylogeny and Support a Grouping of the Mitochondria with the Rickettsiales

1 reference

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https://api.crossref.org/works/10.1002%2FBIES.201100045

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21 January 2018

Comment on "A bacterium that can grow by using arsenic instead of phosphorus"

1 reference

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https://api.crossref.org/works/10.1002%2FBIES.201100045

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21 January 2018

Sterols in a psychrophilic methanotroph, Methylosphaera hansonii

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reference URL

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27 November 2018

Thermoreduction, a hypothesis for the origin of prokaryotes

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PubMed Central

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27 November 2018

Convergent evolution of lysozyme sequences?

1 reference

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Crossref

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https://api.crossref.org/works/10.1002%2FBIES.201100045

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21 January 2018

Comment on "A Bacterium That Can Grow by Using Arsenic Instead of Phosphorus"

1 reference

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reference URL

https://pubmed.ncbi.nlm.nih.gov/21858844

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The evolution of eukaryotes

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21858844

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comment on "A Bacterium That Can Grow by Using Arsenic Instead of Phosphorus"

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21858844

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Archaea-like genes for C1-transfer enzymes in Planctomycetes: phylogenetic implications of their unexpected presence in this phylum

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21858844

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comment on "A Bacterium That Can Grow by Using Arsenic Instead of Phosphorus"

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21858844

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcription and translation are coupled in Archaea

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21858844

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comment on "A Bacterium That Can Grow by Using Arsenic Instead of Phosphorus"

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21858844

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comment on "A Bacterium That Can Grow by Using Arsenic Instead of Phosphorus"

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21858844

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Intermediate Steps

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21858844

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Frequency and distribution of DNA uptake signal sequences in the Haemophilus influenzae Rd genome

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21858844

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comment on "A Bacterium That Can Grow by Using Arsenic Instead of Phosphorus"

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21858844

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1002/BIES.201100045

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4184783

OpenCitations bibliographic resource ID

4184783

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4184783

PMC publication ID

3795523

0 references

PubMed publication ID

21858844

0 references

ResearchGate publication ID

51587643

0 references

 

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