A crystallographic study of the binding of 13 metal ions to two related RNA duplexes (Q27641179)

full work available at URL

31 December 2023

author name string

Eric Ennifar

series ordinal

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Philippe Walter

series ordinal

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Philippe Dumas

series ordinal

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language of work or name

English

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publication date

15 May 2003

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https://academic.oup.com/nar/article-pdf/31/10/2671/3971437/gkg350.pdf

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12736317

https://europepmc.org/articles/PMC156032

31 December 2023

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12736317

https://europepmc.org/articles/PMC156032?pdf=render

31 December 2023

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12736317

http://academic.oup.com/nar/article-pdf/31/10/2671/3971437/gkg350.pdf

31 December 2023

1 reference

https://api.crossref.org/works/10.1093/NAR/GKG350

A compact RNA tertiary structure contains a buried backbone-K+ complex

31 December 2023

published in

Nucleic Acids Research

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volume

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issue

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page(s)

2671-82

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cites work

1 reference

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Destabilizing effect of a fluorouracil extra base in a hybrid RNA duplex compared with bromo and chloro analogues

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Structural basis of the enhanced stability of a mutant ribozyme domain and a detailed view of RNA--solvent interactions

20 March 2017

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Detection of alkali metal ions in DNA crystals using state-of-the-art X-ray diffraction experiments

20 March 2017

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Structure of an RNA duplex with an unusual G.C pair in wobble-like conformation at 1.6 A resolution

20 March 2017

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Solution structure and metal-ion binding of the P4 element from bacterial RNase P RNA

20 March 2017

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The extended and eccentric E-DNA structure induced by cytosine methylation or bromination

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2.8 A crystal structure of the malachite green aptamer

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Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes

20 March 2017

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20 March 2017

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Solution structure of Cobalt(III)hexammine complexed to the GAAA tetraloop, and metal-ion binding to G.A mismatches

20 March 2017

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The crystal structure of the dimerization initiation site of genomic HIV-1 RNA reveals an extended duplex with two adenine bulges

20 March 2017

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Structure and thermodynamics of metal binding in the P5 helix of a group I intron ribozyme

20 March 2017

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Crystal structure and improved antisense properties of 2'-O-(2-methoxyethyl)-RNA

20 March 2017

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A detailed view of a ribosomal active site: the structure of the L11-RNA complex

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Crystal structure of acceptor stem of tRNA(Ala) from Escherichia coli shows unique G.U wobble base pair at 1.16 A resolution

20 March 2017

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Crystal structure of a lead-dependent ribozyme revealing metal binding sites relevant to catalysis

20 March 2017

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A 1.3-A resolution crystal structure of the HIV-1 trans-activation response region RNA stem reveals a metal ion-dependent bulge conformation

20 March 2017

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The Structural Basis of Hammerhead Ribozyme Self-Cleavage

20 March 2017

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Solution structure of a metal-binding site in the major groove of RNA complexed with cobalt (III) hexammine

20 March 2017

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Capturing the structure of a catalytic RNA intermediate: the hammerhead ribozyme

20 March 2017

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Crystal structure of a group I ribozyme domain: principles of RNA packing

20 March 2017

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Structure of a mispaired RNA double helix at 1.6-A resolution and implications for the prediction of RNA secondary structure

20 March 2017

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20 March 2017

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Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

20 March 2017

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Effects of trace metal compounds on HIV-1 reverse transcriptase: an in vitro study

20 March 2017

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Identification of phosphate groups involved in metal binding and tertiary interactions in the core of the Neurospora VS ribozyme

20 March 2017

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20 March 2017

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20 March 2017

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29 September 2017

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29 September 2017

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2 June 2018

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Identification of the metal ion binding site on an RNA motif from hammerhead ribozymes using (15)N NMR spectroscopy

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The interpretation of Mg(2+) binding isotherms for nucleic acids using Poisson-Boltzmann theory.

27 November 2018

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X-ray-induced debromination of nucleic acids at the Br K absorption edge and implications for MAD phasing

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The reversible reaction of Hg (II) and double-stranded polynucleotides a step-function theory and its significance

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Processing of X-ray diffraction data collected in oscillation mode

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[14] Heavy metal ion-nucleic acid interaction

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Pb(II)-catalysed cleavage of the sugar–phosphate backbone of yeast tRNAPhe—implications for lead toxicity and self-splicing RNA

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Structure and activity of the hairpin ribozyme in its natural junction conformation: effect of metal ions

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Identifiers

DOI

10.1093/NAR/GKG350

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