Dramatic structural and thermodynamic consequences of repacking a protein's hydrophobic core (Q27629798)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

title

Dramatic structural and thermodynamic consequences of repacking a protein's hydrophobic core (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

1 reference

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

M A Willis

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

B Bishop

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

L Regan

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

publication date

1 December 2000

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

number of pages

1 reference

inferred from page(s)

published in

Structure

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

volume

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

issue

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

page(s)

1319-1328

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json

Areas, volumes, packing and protein structure

4 November 2019

cites work

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Influence of interior packing and hydrophobicity on the stability of a protein.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

The role of internal packing interactions in determining the structure and stability of a protein

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Response of a protein structure to cavity-creating mutations and its relation to the hydrophobic effect

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

The hydrophobic core of Escherichia coli thioredoxin shows a high tolerance to nonconservative single amino acid substitutions

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Effect of cavity-creating mutations in the hydrophobic core of chymotrypsin inhibitor 2

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

The crystal structure of a mutant protein with altered but improved hydrophobic core packing

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Redesigning the hydrophobic core of a four-helix-bundle protein

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

What makes a protein a protein? Hydrophobic core designs that specify stability and structural properties

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

The response of T4 lysozyme to large-to-small substitutions within the core and its relation to the hydrophobic effect.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

A switch between two-, three-, and four-stranded coiled coils in GCN4 leucine zipper mutants

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

De novo design of a model peptide sequence to examine the effects of single amino acid substitutions in the hydrophobic core on both stability and oligomerization state of coiled-coils

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Characterization of a helical protein designed from first principles

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Protein design by binary patterning of polar and nonpolar amino acids

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Cooperatively folded proteins in random sequence libraries

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Core-directed protein design. I. An experimental method for selecting stable proteins from combinatorial libraries

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Tertiary templates for proteins. Use of packing criteria in the enumeration of allowed sequences for different structural classes

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

De novo design of the hydrophobic cores of proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Protein design automation

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Prediction of protein side-chain conformation by packing optimization.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Repacking protein cores with backbone freedom: structure prediction for coiled coils

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Structure of the ColE1 rop protein at 1.7 A resolution

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

The structure of ColE1 rop in solution

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Determinants of RNA hairpin loop-loop complex stability.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Protein plasticity to the extreme: changing the topology of a 4-alpha-helical bundle with a single amino acid substitution

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Dissecting RNA-protein interactions: RNA-RNA recognition by Rop

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

The Alacoil: a very tight, antiparallel coiled-coil of helices

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Buried polar residues and structural specificity in the GCN4 leucine zipper

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

The heat capacity of proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Prediction of binding energetics from structure using empirical parameterization

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Satisfying hydrogen bonding potential in proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Occluded molecular surface: analysis of protein packing.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Side-chain conformational entropy in protein folding

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

On the entropy of protein folding

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Amino-acid substitutions in a surface turn modulate protein stability

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

ColE1-compatible vectors for high-level expression of cloned DNAs from the T7 promoter.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Conformational stability of HPr: the histidine-containing phosphocarrier protein from Bacillus subtilis

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

SAmBA: an interactive software for optimizing the design of biological macromolecules crystallization experiments.

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

A highly automated heavy-atom search procedure for macromolecular structures

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Direct observation of protein solvation and discrete disorder with experimental crystallographic phases

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Methods used in the structure determination of bovine mitochondrial F1 ATPase

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Improved Fourier coefficients for maps using phases from partial structures with errors

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Torsion angle dynamics: reduced variable conformational sampling enhances crystallographic structure refinement

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Incorporation of prior phase information strengthens maximum-likelihood structure refinement

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Stereochemically restrained refinement of macromolecular structures

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Backbone-dependent rotamer library for proteins. Application to side-chain prediction

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

An extensively modified version of MolScript that includes greatly enhanced coloring capabilities

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

Raster3D: photorealistic molecular graphics

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

PROMOTIF--a program to identify and analyze structural motifs in proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

The interpretation of protein structures: Estimation of static accessibility

1 reference

https://api.crossref.org/works/10.1016%2FS0969-2126%2800%2900544-X

7 January 2021

10.1016/S0969-2126(00)00544-X

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json

4 November 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11188696%20AND%20SRC:MED&resulttype=core&format=json