CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats (Q27496515)

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scientific article (publication date: 18 June 2007)

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Language	Label	Description	Also known as
English	CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats	scientific article (publication date: 18 June 2007)

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scholarly article

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review article

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Europe PubMed Central

title

CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats (English)

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main subject

CRISPR

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automation

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based on heuristic

inferred from title

author

Philip Hugenholtz

series ordinal

7

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Nikos C. Kyrpides

object named as

Nikos C Kyrpides

series ordinal

6

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author name string

Charles Bland

series ordinal

1

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Teresa L Ramsey

series ordinal

2

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Fareedah Sabree

series ordinal

3

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Micheal Lowe

series ordinal

4

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Kyndall Brown

series ordinal

5

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publication date

18 June 2007

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published in

BMC Bioinformatics

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volume

8

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issue

1

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page(s)

209

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copyright license

Creative Commons Attribution 2.0 Generic

start time

18 June 2007

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April 2022 Public Data File from Crossref

copyright status

copyrighted

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stated in

April 2022 Public Data File from Crossref

cites work

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20 March 2017

PILER-CR: fast and accurate identification of CRISPR repeats

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20 March 2017

A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

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20 March 2017

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20 March 2017

A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes

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20 March 2017

Associations between inverted repeats and the structural evolution of bacterial genomes

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20 March 2017

Short-sequence DNA repeats in prokaryotic genomes

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20 March 2017

Identification of common molecular subsequences

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20 March 2017

A general method applicable to the search for similarities in the amino acid sequence of two proteins

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PubMed Central

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20 March 2017

Clustered regularly interspaced short palindrome repeats (CRISPRs) have spacers of extrachromosomal origin

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PubMed Central

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7 April 2017

Intervening sequences of regularly spaced prokaryotic repeats derive from foreign genetic elements

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PubMed Central

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7 April 2017

Identification of genes that are associated with DNA repeats in prokaryotes

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7 April 2017

REPuter: the manifold applications of repeat analysis on a genomic scale

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7 April 2017

PILER: identification and classification of genomic repeats

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29 September 2017

Why repetitive DNA is essential to genome function

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29 September 2017

CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies.

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PubMed Central

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29 September 2017

Short sequence repeats in microbial pathogenesis and evolution

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29 September 2017

Functional and evolutionary roles of long repeats in prokaryotes.

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29 September 2017

Searching for patterns in genomic data

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29 September 2017

Genome update: DNA repeats in bacterial genomes

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PubMed Central

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2 June 2018

The repetitive DNA elements called CRISPRs and their associated genes: evidence of horizontal transfer among prokaryotes.

1 reference

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PubMed Central

reference URL

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retrieved

27 November 2018

Biological significance of a family of regularly spaced repeats in the genomes of Archaea, Bacteria and mitochondria.

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1924867

retrieved

27 November 2018

Identifiers

DOI

10.1186/1471-2105-8-209

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

457807

DBLP publication ID

journals/bmcbi/BlandRSLBKH07

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stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

Dimensions Publication ID

1020623557

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Fatcat ID

release_sowso37zvvaitbhfggjunc7ddq

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Fatcat

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https://api.fatcat.wiki/v0/release/sowso37zvvaitbhfggjunc7ddq

retrieved

24 November 2022

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mapped directly with Wikidata item

OpenCitations bibliographic resource ID

457807

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

457807

PMC publication ID

1924867

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

457807

PubMed publication ID

17577412

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

457807

ResearchGate publication ID

6260577

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