Exaptation of Bornavirus-Like Nucleoprotein Elements in Afrotherians (Q27312400)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27518265%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Yuki Kobayashi

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27518265%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Ayumi Nakano

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27518265%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Koichi Murata

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27518265%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Takuya Itou

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27518265%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

Yoshiyuki Suzuki

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27518265%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

language of work or name

English

0 references

publication date

August 2016

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published in

PLOS Pathogens

1 reference

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12 June 2020

volume

1 reference

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12 June 2020

issue

1 reference

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12 June 2020

page(s)

e1005785

1 reference

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Creative Commons Attribution 4.0 International

12 June 2020

start time

12 August 2016

1 reference

April 2022 Public Data File from Crossref

copyrighted

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describes a project that uses

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4982594/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

cites work

MEGA6: Molecular Evolutionary Genetics Analysis version 6.0

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Take the (RN)A-train: localization of mRNA to the endoplasmic reticulum

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Endogenous viral elements in animal genomes

21 March 2017

1 reference

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Unexpected inheritance: multiple integrations of ancient bornavirus and ebolavirus/marburgvirus sequences in vertebrate genomes

21 March 2017

1 reference

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Endogenous non-retroviral RNA virus elements in mammalian genomes

21 March 2017

1 reference

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YASS: enhancing the sensitivity of DNA similarity search

21 March 2017

1 reference

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PAML 4: phylogenetic analysis by maximum likelihood

21 March 2017

1 reference

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From ancestral infectious retroviruses to bona fide cellular genes: role of the captured syncytins in placentation

21 March 2017

1 reference

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CpG islands and the regulation of transcription

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

An RNA-dependent RNA polymerase gene in bat genomes derived from an ancient negative-strand RNA virus

21 March 2017

1 reference

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Genomic Mining Reveals Deep Evolutionary Relationships between Bornaviruses and Bats

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

piRNAs derived from ancient viral processed pseudogenes as transgenerational sequence-specific immune memory in mammals

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Fighting fire with fire: endogenous retrovirus envelopes as restriction factors

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Endogenous hepadnaviruses, bornaviruses and circoviruses in snakes

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Comprehensive analysis of endogenous bornavirus-like elements in eukaryote genomes

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Tracking the past: interspersed repeats in an extinct Afrotherian mammal, Mammuthus primigenius

21 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

TimeTree: a public knowledge-base of divergence times among organisms

21 March 2017

1 reference

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Towards a knowledge-based Human Protein Atlas

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

X-linked RNA-binding motif protein (RBMX) is required for the maintenance of Borna disease virus nuclear viral factories

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Transcription Profiling Demonstrates Epigenetic Control of Non-retroviral RNA Virus-Derived Elements in the Human Genome

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

GeneMatcher: a matching tool for connecting investigators with an interest in the same gene

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Endogenous viruses: Connecting recent and ancient viral evolution

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Taxonomic reorganization of the family Bornaviridae

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

DBTSS as an integrative platform for transcriptome, epigenome and genome sequence variation data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Inhibition of Borna disease virus replication by an endogenous bornavirus-like element in the ground squirrel genome.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Paleovirology and virally derived immunity

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Studies of endogenous retroviruses reveal a continuing evolutionary saga

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

The evolution of endogenous viral elements

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

No Evidence for Natural Selection on Endogenous Borna-Like Nucleoprotein Elements after the Divergence of Old World and New World Monkeys

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Addressing mRNAs to the ER: cis sequences act up!

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Effects of retroviruses on host genome function.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Origins and evolution of cotranslational transport to the ER.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

A retroposon analysis of Afrotherian phylogeny

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Ancient SINEs from African endemic mammals

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Molecular and cellular biology of Borna disease virus infection

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Borna disease virus nucleoprotein requires both nuclear localization and export activities for viral nucleocytoplasmic shuttling

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Better prediction of protein cellular localization sites with the k nearest neighbors classifier

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Origin of an endogenous bornavirus-like nucleoprotein element in thirteen-lined ground squirrels.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

CpG islands as gene markers in the human genome.

31 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4982594

Afrotherian mammals: a review of current data

31 May 2018

1 reference

Crossref

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1005785

ADAPTSITE: detecting natural selection at single amino acid sites

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/27518265

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PPAT.1005785

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27518265%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27518265%20AND%20SRC:MED&resulttype=core&format=json

12 June 2020

PubMed publication ID

27518265

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27518265%20AND%20SRC:MED&resulttype=core&format=json