Toward a Molecular Phylogeny for Peromyscus: Evidence from Mitochondrial Cytochrome-bSequences (Q24655436)

From Wikidata

Jump to navigation Jump to search

scientific article

edit

Language	Label	Description	Also known as
English	Toward a Molecular Phylogeny for Peromyscus: Evidence from Mitochondrial Cytochrome-bSequences	scientific article

Statements

instance of

scholarly article

0 references

title

Toward a Molecular Phylogeny for Peromyscus: Evidence from Mitochondrial Cytochrome-bSequences (English)

0 references

main subject

phylogenetics

1 reference

based on heuristic

inferred from title

molecular phylogenetics

0 references

author name string

Robert D Bradley

series ordinal

1

0 references

Nevin D Durish

series ordinal

2

0 references

Duke S Rogers

series ordinal

3

0 references

Jacqueline R Miller

series ordinal

4

0 references

Mark D Engstrom

series ordinal

5

0 references

C William Kilpatrick

series ordinal

6

0 references

publication date

1 January 2007

0 references

published in

Journal of Mammalogy

0 references

volume

88

0 references

issue

5

0 references

page(s)

1146-1159

0 references

cites work

The neighbor-joining method: a new method for reconstructing phylogenetic trees

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

7 April 2017

Bear Canyon virus: an arenavirus naturally associated with the California mouse (Peromyscus californicus)

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

7 April 2017

MRBAYES: Bayesian inference of phylogenetic trees

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

7 April 2017

MODELTEST: testing the model of DNA substitution

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

7 April 2017

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

7 April 2017

Primer-directed enzymatic amplification of DNA with a thermostable DNA polymerase

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

7 April 2017

Molecular phylogenetics of the Peromyscus boylii species group (Rodentia: muridae) based on mitochondrial cytochrome b sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

7 April 2017

Estimation of primate speciation dates using local molecular clocks

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

7 April 2017

Speciation in mammals and the genetic species concept

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

7 April 2017

DAMBE: software package for data analysis in molecular biology and evolution

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

7 April 2017

Evolution of the cytochrome b gene of mammals

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

7 April 2017

Primate phylogeny, evolutionary rate variations, and divergence times: a contribution from the nuclear gene IRBP.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Phylogeny of Passerida (Aves: Passeriformes) based on nuclear and mitochondrial sequence data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Rodent phylogeny and a timescale for the evolution of Glires: evidence from an extensive taxon sampling using three nuclear genes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Phylogeography and molecular systematics of the Peromyscus aztecus species group (Rodentia: Muridae) inferred using parsimony and likelihood

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Deer mice: "The Drosophila of North American mammalogy".

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Genetic Analysis of the Diversity and Origin of Hantaviruses in Peromyscus leucopus Mice in North America

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Seroepidemiologic studies of hantavirus infection among wild rodents in California

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Patterns of association with host and habitat: antibody reactive with Sin Nombre virus in small mammals in the major biotic communities of the southwestern United States.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Molecular evolutionary dynamics of cytochrome b in strepsirrhine primates: the phylogenetic significance of third-position transversions

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Phylogenetic performance of mitochondrial protein-coding genes in resolving relationships among vertebrates

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Molecular basis of the alcohol dehydrogenase-negative deer mouse. Evidence for deletion of the gene for class I enzyme and identification of a possible new enzyme class.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Cytogenetic nomenclature of deer mice, Peromyscus (Rodentia): revision and review of the standardized karyotype. Report of the Committee for the Standardization of Chromosomes of Peromyscus

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Mice as reservoirs of the Lyme disease spirochete

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Serologic analyses of Peromyscus leucopus, a rodent reservoir for Borrelia burgdorferi, in northeastern United States

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Comparing the relative potential of rodents as reservoirs of the Lyme disease spirochete (Borrelia burgdorferi).

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Unequal crossing over and heterochromatin exchange in the X-Y bivalents of the deer mouse, Peromyscus beatae

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 September 2017

Neotomine-peromyscine rodent systematics based on combined analyses of nuclear and mitochondrial DNA sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

30 May 2018

Systematics of New World monkeys (Platyrrhini, Primates) based on 16S mitochondrial DNA sequences: a comparative analysis of different weighting methods in cladistic analysis.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

30 May 2018

Among-site rate variation and phylogenetic analysis of 12S rRNA in sigmodontine rodents

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

30 May 2018

A household-based, case-control study of environmental factors associated with hantavirus pulmonary syndrome in the southwestern United States

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

30 May 2018

An assessment of the nature of chromosomal rearrangements in 18 species of Peromyscus (Rodentia: Cricetidae).

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

30 May 2018

Evidence for heterosynaptic pairing of the inverted segment in pericentric inversion heterozygotes of the deer mouse (Peromyscus maniculatus).

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

30 May 2018

Ethanol-metabolizing pathways in deermice. Estimation of flux calculated from isotope effects

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

30 May 2018

The impact of parsimony weighting schemes on inferred relationships among toucans and neotropical barbets (Aves: piciformes).

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

19 June 2018

Serosurvey of wild rodents for hantaviruses in Panama, 2000-2002.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 November 2018

Nucleotide substitution models and estimation of phylogeny.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 November 2018

The cytochrome b gene as a phylogenetic marker: the limits of resolution for analyzing relationships among cichlid fishes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 November 2018

Mitochondrial versus nuclear gene sequences in deep-level mammalian phylogeny reconstruction

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 November 2018

Molecular systematics and paleobiogeography of the South American sigmodontine rodents

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 November 2018

Competence of Peromyscus maniculatus (Rodentia: Cricetidae) as a reservoir host for Borrelia burgdorferi (Spirochaetares: Spirochaetaceae) in the wild

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 November 2018

Serologic and genetic identification of Peromyscus maniculatus as the primary rodent reservoir for a new hantavirus in the southwestern United States

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 November 2018

Mammalian mitochondrial DNA evolution: a comparison of the cytochrome b and cytochrome c oxidase II genes.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2778318

retrieved

28 November 2018

Lineage-specific evolutionary rate in mammalian mtDNA

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Biochemical genetics of the truei and boylei groups of the genus Peromyscus (Rodentia)

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Synaptic adjustment in Peromyscus beatae (Rodentia: Cricetidae) heterozygous for interstitial heterochromatin

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

SYNAPTIC ADAPTATION IN DEER MICE: A CELLULAR MECHANISM FOR KARYOTYPIC ORTHOSELECTION

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

THE GENETICS OF SPECIATION IN THE RODENT GENUS PEROMYSCUS

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CHROMOSOMAL EVOLUTION AND THE MODE OF SPECIATION IN THREE SPECIES OF PEROMYSCUS.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Synapsis of a chromosomal pair heterozygous for a pericentric inversion and the presence of a heterochromatic short arm

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromosomal pairing in deer mice heterozygous for the presence of heterochromatic short arms

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Heterosynapsis and suppression of chiasmata within heterozygous pericentric inversions of the Sitka deer mouse

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The mechanism of autosomal synapsis and the substaging of zygonema and pachynema from deer mouse spermatocytes

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Determination of the primitive karyotype for Peromyscus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

p-nitrosophenol reduction by liver cytosol from ADH-positive and -negative deermice (Peromyscus maniculatus)

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Standardized karyotype of deer mice, Peromyscus (Rodentia). The Committee for Standardization of Chromosomes of Peromyscus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

How common are common fragile sites: variation of aphidicolin-induced chromosomal fragile sites in a population of the deer mouse ( Peromyscus maniculatus )

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/19924266

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phylogenetic Relationships and the Radiation of Sigmodontine Rodents in South America: Evidence from Cytochrome b

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1644%2F06-MAMM-A-342R.1

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1644%2F06-MAMM-A-342R.1

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

Confidence Limits on Phylogenies: an Approach using the Bootstrap

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1644%2F06-MAMM-A-342R.1

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

MOLECULAR SYSTEMATICS OF NEOTOMINE–PEROMYSCINE RODENTS BASED ON THE DENTIN MATRIX PROTEIN 1 GENE

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1644%2F06-MAMM-A-342R.1

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

PHYLOGENETIC RELATIONSHIPS OF NEOTOMINE–PEROMYSCINE RODENTS: BASED ON DNA SEQUENCES FROM THE MITOCHONDRIAL CYTOCHROME-bGENE

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1644%2F06-MAMM-A-342R.1

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

The Glans Penes and Bacula in Latin American Taxa of the Peromyscus boylii Group

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1644%2F06-MAMM-A-342R.1

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

A Successive Approximations Approach to Character Weighting

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1644%2F06-MAMM-A-342R.1

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

A REVISION OF THE MICE OF THE AMERICAN GENUS PEROMYSCUS

1 reference

stated in

Crossref

reference URL

https://api.crossref.org/works/10.1644%2F06-MAMM-A-342R.1

retrieved

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

DOI

10.1644/06-MAMM-A-342R.1

0 references

PMC publication ID

2778318

0 references

PubMed publication ID

19924266

0 references

 

Sitelinks

Wikipedia(0 entries)

edit

Wikibooks(0 entries)

edit

Wikinews(0 entries)

edit

Wikiquote(0 entries)

edit

Wikisource(0 entries)

edit

Wikiversity(0 entries)

edit

Wikivoyage(0 entries)

edit

Wiktionary(0 entries)

edit

Multilingual sites(0 entries)

edit

Retrieved from "https://www.wikidata.org/w/index.php?title=Q24655436&oldid=1547343326"