A statistical sampling algorithm for RNA secondary structure prediction (Q24617509)

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English	A statistical sampling algorithm for RNA secondary structure prediction	scientific article

Statements

instance of

scholarly article

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title

A statistical sampling algorithm for RNA secondary structure prediction (English)

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main subject

statistics

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author name string

Ye Ding

series ordinal

1

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Charles E Lawrence

series ordinal

2

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language of work or name

English

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publication date

15 December 2003

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published in

Nucleic Acids Research

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volume

31

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issue

24

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page(s)

7280-301

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cites work

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Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

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7 April 2017

The equilibrium partition function and base pair binding probabilities for RNA secondary structure

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7 April 2017

On finding all suboptimal foldings of an RNA molecule

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7 April 2017

Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs

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7 April 2017

Compilation of tRNA sequences and sequences of tRNA genes

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7 April 2017

The Structural Basis of Large Ribosomal Subunit Function

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27 September 2017

The activity of siRNA in mammalian cells is related to structural target accessibility: a comparison with antisense oligonucleotides

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Expression of small interfering RNAs targeted against HIV-1 rev transcripts in human cells

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27 September 2017

Statistical prediction of single-stranded regions in RNA secondary structure and application to predicting effective antisense target sites and beyond

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27 September 2017

Selecting optimal antisense reagents

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The Leptomonas collosoma spliced leader RNA can switch between two alternate structural forms

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A dynamic programming algorithm for finding alternative RNA secondary structures

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27 September 2017

Alternative mRNA structures of the cIII gene of bacteriophage lambda determine the rate of its translation initiation

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27 September 2017

RNA structure prediction

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27 September 2017

Complete suboptimal folding of RNA and the stability of secondary structures.

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Landscapes: complex optimization problems and biopolymer structures

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Does 5S RNA function by a switch between two secondary structures?

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Efficient reduction of target RNAs by small interfering RNA and RNase H-dependent antisense agents. A comparative analysis

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28 November 2018

Calculating nucleic acid secondary structure

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28 November 2018

A bayesian statistical algorithm for RNA secondary structure prediction

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28 November 2018

Density of states, metastable states, and saddle points exploring the energy landscape of an RNA molecule.

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PubMed Central

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28 November 2018

RNA multi-structure landscapes. A study based on temperature dependent partition functions.

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PubMed Central

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28 November 2018

The efficacy of small interfering RNAs targeted to the type 1 insulin-like growth factor receptor (IGF1R) is influenced by secondary structure in the IGF1R transcript

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/14654704

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Secondary structure of mRNA and efficiency of translation initiation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/14654704

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A general model for the conformational switch in 5S RNA during protein synthesis

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/14654704

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/NAR/GKG938

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1870863

OpenCitations bibliographic resource ID

1870863

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1870863

PMC publication ID

297010

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1870863

PubMed publication ID

14654704

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1870863

ResearchGate publication ID

8976556

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