The human microbiome: our second genome (Q24601696)

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Language	Label	Description	Also known as
English	The human microbiome: our second genome	scientific article

Statements

instance of

scholarly article

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title

The human microbiome: our second genome (English)

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main subject

microbiome

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author name string

Elizabeth A Grice

series ordinal

1

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Julia A Segre

series ordinal

2

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language of work or name

English

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publication date

2012

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published in

Annual Review of Genomics and Human Genetics

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stated in

PubMed

volume

13

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issue

1

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page(s)

151-70

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cites work

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7 April 2017

Use of ichip for high-throughput in situ cultivation of "uncultivable" microbial species

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The NIH Human Microbiome Project

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A human colonic commensal promotes colon tumorigenesis via activation of T helper type 17 T cell responses

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7 April 2017

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7 April 2017

A diversity profile of the human skin microbiota

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7 April 2017

Development of the human infant intestinal microbiota

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7 April 2017

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7 April 2017

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7 April 2017

Metagenomic analysis of the human distal gut microbiome

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7 April 2017

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7 April 2017

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7 April 2017

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7 April 2017

Novel division level bacterial diversity in a Yellowstone hot spring

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7 April 2017

Bacterial community structures of phosphate-removing and non-phosphate-removing activated sludges from sequencing batch reactors

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7 April 2017

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

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7 April 2017

Bacterial evolution

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Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses

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Open-Source Genomic Analysis of Shiga-Toxin–Producing E. coli O104:H4

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7 April 2017

Microbial ecology of the gastrointestinal tract

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7 April 2017

An obesity-associated gut microbiome with increased capacity for energy harvest

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7 April 2017

The KEGG resource for deciphering the genome

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7 April 2017

Demodex mites: Facts and controversies

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Vaginal microbiome of reproductive-age women

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7 April 2017

Ecological and evolutionary forces shaping microbial diversity in the human intestine

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7 April 2017

Comparative metagenomics of microbial communities

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7 April 2017

Community structure and metabolism through reconstruction of microbial genomes from the environment

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7 April 2017

Metabolic syndrome and altered gut microbiota in mice lacking Toll-like receptor 5

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7 April 2017

CRISPR interference: RNA-directed adaptive immunity in bacteria and archaea

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7 April 2017

The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing

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Factors influencing the composition of the intestinal microbiota in early infancy

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7 April 2017

Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies

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27 September 2017

Experimental and analytical tools for studying the human microbiome

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27 September 2017

Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome

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27 September 2017

Drosophila microbiome modulates host developmental and metabolic homeostasis via insulin signaling

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27 September 2017

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27 September 2017

The human gut virome: inter-individual variation and dynamic response to diet

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27 September 2017

The oral metagenome in health and disease

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27 September 2017

Metagenomic biomarker discovery and explanation

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27 September 2017

Predicting a human gut microbiota's response to diet in gnotobiotic mice

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27 September 2017

The inflammatory microenvironment in colorectal neoplasia

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27 September 2017

Analysis of streptococcal CRISPRs from human saliva reveals substantial sequence diversity within and between subjects over time.

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27 September 2017

Characteristic male urine microbiomes associate with asymptomatic sexually transmitted infection

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27 September 2017

Vancomycin-resistant Enterococcus domination of intestinal microbiota is enabled by antibiotic treatment in mice and precedes bloodstream invasion in humans.

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27 September 2017

TOPSAN: a dynamic web database for structural genomics

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27 September 2017

Individuality in gut microbiota composition is a complex polygenic trait shaped by multiple environmental and host genetic factors

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27 September 2017

Human oral, gut, and plaque microbiota in patients with atherosclerosis

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27 September 2017

Molecular analysis of the diversity of vaginal microbiota associated with bacterial vaginosis

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27 September 2017

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27 September 2017

Viruses in the faecal microbiota of monozygotic twins and their mothers

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27 September 2017

Metagenomic detection of phage-encoded platelet-binding factors in the human oral cavity

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27 September 2017

A catalog of reference genomes from the human microbiome

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27 September 2017

One bacterial cell, one complete genome

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27 September 2017

Bacterial diversity in the oral cavity of 10 healthy individuals

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27 September 2017

AMD biofilms: using model communities to study microbial evolution and ecological complexity in nature.

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27 September 2017

Correlation between ocular Demodex infestation and serum immunoreactivity to Bacillus proteins in patients with Facial rosacea

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27 September 2017

Pharmacometabonomic identification of a significant host-microbiome metabolic interaction affecting human drug metabolism

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27 September 2017

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27 September 2017

Statistical methods for detecting differentially abundant features in clinical metagenomic samples

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PubMed Central

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

The influence of sex, handedness, and washing on the diversity of hand surface bacteria

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Diversity of human vaginal bacterial communities and associations with clinically defined bacterial vaginosis.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Analysis of Malassezia microbiota in healthy superficial human skin and in psoriatic lesions by multiplex real-time PCR.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Innate immune homeostasis by the homeobox gene caudal and commensal-gut mutualism in Drosophila.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Dissecting biological "dark matter" with single-cell genetic analysis of rare and uncultivated TM7 microbes from the human mouth

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Mite-related bacterial antigens stimulate inflammatory cells in rosacea.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Molecular analysis of human forearm superficial skin bacterial biota

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

The ribosomal database project (RDP-II): introducing myRDP space and quality controlled public data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Application of sequence-based methods in human microbial ecology

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Sampling the antibiotic resistome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Defining the normal bacterial flora of the oral cavity

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Uncultured soil bacteria are a reservoir of new antibiotic resistance genes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Rapid amplification of plasmid and phage DNA using Phi 29 DNA polymerase and multiply-primed rolling circle amplification

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

An archaeal iron-oxidizing extreme acidophile important in acid mine drainage

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

DGGE/TGGE a method for identifying genes from natural ecosystems.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Identifying microbial diversity in the natural environment: a molecular phylogenetic approach.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

27 September 2017

What are the consequences of the disappearing human microbiota?

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

28 November 2018

Bacteria subsisting on antibiotics

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

28 November 2018

Analysis of hydrothermal vent-associated symbionts by ribosomal RNA sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

28 November 2018

Distribution of thiobacillus ferrooxidans and leptospirillum ferrooxidans: implications for generation of acid mine drainage

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3518434

retrieved

28 November 2018

Demodex and skin infection: fact or fiction

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22703178

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Increased density of Demodex folliculorum and evidence of delayed hypersensitivity reaction in subjects with papulopustular rosacea

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22703178

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Frequency and distribution of DNA uptake signal sequences in the Haemophilus influenzae Rd genome

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/22703178

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Bacterial evolution

1 reference

stated in

COCI

retrieved

18 October 2022

reference URL

https://opencitations.net/index/coci/api/v1/citations/10.1128/MR.51.2.221-271.1987

Identifiers

DOI

10.1146/ANNUREV-GENOM-090711-163814

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2259335

OpenCitations bibliographic resource ID

2259335

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2259335

PMC publication ID

3518434

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2259335

PubMed publication ID

22703178

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2259335

ResearchGate publication ID

227162322

0 references

 

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