Pages that link to "Q39946368"
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The following pages link to DNA and its counterions: a molecular dynamics study (Q39946368):
Displaying 50 items.
- The role of methylation in the intrinsic dynamics of B- and Z-DNA (Q21134614) (← links)
- Role of histone tails in structural stability of the nucleosome (Q21145319) (← links)
- Similarities and differences in interaction of K+ and Na+ with condensed ordered DNA. A molecular dynamics computer simulation study (Q24540175) (← links)
- The contribution of phosphate-phosphate repulsions to the free energy of DNA bending (Q24798770) (← links)
- A coarse graining approach to determine nucleic acid structures from small angle neutron scattering profiles in solution (Q24817039) (← links)
- Molecular dynamics simulations of sarcin-ricin rRNA motif. (Q25255860) (← links)
- Physicochemical Properties of Ion Pairs of Biological Macromolecules (Q26782002) (← links)
- Close encounters with DNA (Q26999396) (← links)
- The 1.3 A resolution structure of the RNA tridecamer r(GCGUUUGAAACGC): Metal ion binding correlates with base unstacking and groove contraction (Q27648800) (← links)
- Unusual Salt and pH Induced Changes in Polyethylenimine Solutions (Q28554398) (← links)
- Refinement of the AMBER force field for nucleic acids: improving the description of alpha/gamma conformers (Q29615408) (← links)
- CheckMyMetal: a macromolecular metal-binding validation tool (Q30252957) (← links)
- Molecular dynamics of a kappaB DNA element: base flipping via cross-strand intercalative stacking in a microsecond-scale simulation (Q30483365) (← links)
- Structure, Stiffness and Substates of the Dickerson-Drew Dodecamer. (Q30663429) (← links)
- A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA. (Q33566434) (← links)
- Analyzing ion distributions around DNA. (Q33843177) (← links)
- Structure and properties of DNA in apolar solvents. (Q34014680) (← links)
- Molecular dynamics simulations of the 136 unique tetranucleotide sequences of DNA oligonucleotides. I. Research design and results on d(CpG) steps (Q34188047) (← links)
- The ABCs of molecular dynamics simulations on B-DNA, circa 2012. (Q34323341) (← links)
- Molecular dynamics simulations of the 136 unique tetranucleotide sequences of DNA oligonucleotides. II: sequence context effects on the dynamical structures of the 10 unique dinucleotide steps (Q34352331) (← links)
- Cadherin mechanics and complexation: the importance of calcium binding (Q34352406) (← links)
- Cations and hydration in catalytic RNA: molecular dynamics of the hepatitis delta virus ribozyme (Q34698713) (← links)
- Ion distributions around left- and right-handed DNA and RNA duplexes: a comparative study (Q34711836) (← links)
- Analyzing ion distributions around DNA: sequence-dependence of potassium ion distributions from microsecond molecular dynamics. (Q35131148) (← links)
- Molecular dynamics of a DNA Holliday junction: the inverted repeat sequence d(CCGGTACCGG)₄. (Q35743231) (← links)
- The genomic HDV ribozyme utilizes a previously unnoticed U-turn motif to accomplish fast site-specific catalysis (Q35804539) (← links)
- Simulations Meet Experiment to Reveal New Insights into DNA Intrinsic Mechanics. (Q35866373) (← links)
- Ranking of Molecular Biomarker Interaction with Targeted DNA Nucleobases via Full Atomistic Molecular Dynamics (Q35889788) (← links)
- Slowing down DNA translocation through a nanopore in lithium chloride (Q35952123) (← links)
- Molecular dynamics simulations of RNA: an in silico single molecule approach. (Q36058510) (← links)
- Mg2+ in the major groove modulates B-DNA structure and dynamics (Q36109636) (← links)
- Conformations of flanking bases in HIV-1 RNA DIS kissing complexes studied by molecular dynamics (Q36176609) (← links)
- The contribution of transient counterion imbalances to DNA bending fluctuations (Q36388531) (← links)
- Parmbsc1: a refined force field for DNA simulations (Q36428161) (← links)
- Determining promoter location based on DNA structure first-principles calculations (Q36465552) (← links)
- Predicting thymine dimerization yields from molecular dynamics simulations (Q36538187) (← links)
- Towards a molecular dynamics consensus view of B-DNA flexibility (Q36633176) (← links)
- Quantitative analysis of monovalent counterion binding to random-sequence, double-stranded DNA using the replacement ion method (Q36869234) (← links)
- Molecular dynamics simulations and their application to four-stranded DNA. (Q36984621) (← links)
- DNA A-tracts are not curved in solutions containing high concentrations of monovalent cations (Q37056125) (← links)
- Monovalent cation binding in the minor groove of DNA A-tracts (Q37143858) (← links)
- Correlated motions and interactions at the onset of the DNA-induced partial unfolding of Ets-1. (Q37279251) (← links)
- Theoretical studies of RNA catalysis: hybrid QM/MM methods and their comparison with MD and QM. (Q37366654) (← links)
- Molecular dynamics simulations of DNA-polycation complex formation (Q37373484) (← links)
- Fluorescence-tunable Ag-DNA biosensor with tailored cytotoxicity for live-cell applications (Q37454722) (← links)
- Ion motions in molecular dynamics simulations on DNA. (Q37571782) (← links)
- Frontiers in Molecular Dynamics Simulations of DNA (Q37914843) (← links)
- Influence of Divalent Counterions on the Dynamics in DNA as Probed by Using a Minor-Groove Binder. (Q38288333) (← links)
- Unusual characteristics of the DNA binding domain of epigenetic regulatory protein MeCP2 determine its binding specificity (Q38307079) (← links)
- Molecular modeling of nucleic Acid structure: electrostatics and solvation (Q38336095) (← links)