Dependence of RelA-Mediated (p)ppGpp Formation on tRNA Identity (Q39575407)

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scientific article published on March 25, 2011

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English	Dependence of RelA-Mediated (p)ppGpp Formation on tRNA Identity	scientific article published on March 25, 2011

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scholarly article

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Europe PubMed Central

PubMed publication ID

21410133

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13 September 2017

title

Dependence of RelA-mediated (p)ppGpp formation on tRNA identity (English)

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Europe PubMed Central

PubMed publication ID

21410133

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13 September 2017

Dependence of RelA-Mediated (p)ppGpp Formation on tRNA Identity (English)

1 reference

stated in

Crossref

DOI

10.1021/BI1015309

reference URL

https://api.crossref.org/works/10.1021/BI1015309

retrieved

27 November 2024

author name string

Roshani Payoe

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1

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Europe PubMed Central

PubMed publication ID

21410133

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13 September 2017

Richard P. Fahlman

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2

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Europe PubMed Central

PubMed publication ID

21410133

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21410133

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27 November 2024

language of work or name

English

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publication date

25 March 2011

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Europe PubMed Central

PubMed publication ID

21410133

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13 September 2017

full work available at URL

https://pubs.acs.org/doi/pdf/10.1021/bi1015309

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Crossref

DOI

10.1021/BI1015309

reference URL

https://api.crossref.org/works/10.1021/BI1015309

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27 November 2024

published in

Biochemistry

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Europe PubMed Central

PubMed publication ID

21410133

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13 September 2017

volume

50

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Europe PubMed Central

PubMed publication ID

21410133

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13 September 2017

issue

15

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Europe PubMed Central

PubMed publication ID

21410133

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13 September 2017

page(s)

3075-3083

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Europe PubMed Central

PubMed publication ID

21410133

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13 September 2017

cites work

(p)ppGpp: still magical?

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10.1021/BI1015309

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27 November 2024

Magic spot: (p) ppGpp

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DOI

10.1021/BI1015309

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https://api.crossref.org/works/10.1021/BI1015309

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27 November 2024

MSI and MSII made on ribosome in idling step of protein synthesis

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10.1021/BI1015309

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27 November 2024

Stringent control of ribosomal protein gene expression in Escherichia coli

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10.1021/BI1015309

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27 November 2024

Transcription profiling of the stringent response in Escherichia coli

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10.1021/BI1015309

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27 November 2024

Growth phase and (p)ppGpp control of IraD, a regulator of RpoS stability, in Escherichia coli

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10.1021/BI1015309

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27 November 2024

A polyphosphate-lon protease complex in the adaptation of Escherichia coli to amino acid starvation

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10.1021/BI1015309

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27 November 2024

Nutritional control of elongation of DNA replication by (p)ppGpp

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10.1021/BI1015309

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The stringent response and cell cycle arrest in Escherichia coli

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10.1021/BI1015309

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27 November 2024

The stringent response genes relA and spoT are important for Escherichia coil biofilms under slow-growth conditions

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10.1021/BI1015309

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27 November 2024

ppGpp-dependent stationary phase induction of genes on Salmonella pathogenicity island 1.

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10.1021/BI1015309

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27 November 2024

The stringent response mediator Rsh is required for Brucella melitensis and Brucella suis virulence, and for expression of the type IV secretion system virB

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10.1021/BI1015309

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27 November 2024

Co-ordination of legionella pneumophila virulence with entry into stationary phase by ppGpp

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10.1021/BI1015309

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27 November 2024

Second messenger signalling governs Escherichia coli biofilm induction upon ribosomal stress.

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10.1021/BI1015309

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27 November 2024

Nonsense and insertion mutants in the relA gene of E. coli: Cloning relA

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10.1021/BI1015309

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27 November 2024

Control of spoT-dependent ppGpp synthesis and degradation in Escherichia coli

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Null mutation of HvrA compensates for loss of an essential relA/spoT-like gene in Rhodobacter capsulatus.

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Stringent control in the archaeal genus Sulfolobus.

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27 November 2024

Cloning the spoT gene of Escherichia coli: identification of the spoT gene product

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27 November 2024

Cloning and characterization of a bifunctional RelA/SpoT homologue from Mycobacterium tuberculosis

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10.1021/BI1015309

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27 November 2024

Selective charging of tRNA isoacceptors induced by amino-acid starvation

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10.1021/BI1015309

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27 November 2024

Synthesis of Guanosine Tetra- and Pentaphosphate Requires the Presence of a Codon-Specific, Uncharged Transfer Ribonucleic Acid in the Acceptor Site of Ribosomes

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10.1021/BI1015309

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27 November 2024

Effect of variation of charged and uncharged tRNA(Trp) levels on ppGpp synthesis in Escherichia coli

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10.1021/BI1015309

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27 November 2024

Dissection of the mechanism for the stringent factor RelA.

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10.1021/BI1015309

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27 November 2024

Uniform binding of aminoacylated transfer RNAs to the ribosomal A and P sites.

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Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. coli K-12 ORF archive): unique resources for biological research

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10.1021/BI1015309

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Characterization of the tRNA and ribosome-dependent pppGpp-synthesis by recombinant stringent factor from Escherichia coli

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10.1021/BI1015309

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[3'-32P]-labeling tRNA with nucleotidyltransferase for assaying aminoacylation and peptide bond formation

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10.1021/BI1015309

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Contribution of the esterified amino acid to the binding of aminoacylated tRNAs to the ribosomal P- and A-sites

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Universally conserved interactions between the ribosome and the anticodon stem-loop of A site tRNA important for translocation

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Shine-Dalgarno interaction prevents incorporation of noncognate amino acids at the codon following the AUG

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Specificity of the ribosomal A site for aminoacyl-tRNAs.

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Quantitative analysis of deoxynucleotide substitutions in the codon-anticodon helix

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Idiosyncratic tuning of tRNAs to achieve uniform ribosome binding

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Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates.

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27 November 2024

Sequence relationship of three valine acceptor tRNAs from Escherichia coli

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tRNA's modifications bring order to gene expression

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Bringing order to translation: the contributions of transfer RNA anticodon-domain modifications

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tRNA stabilization by modified nucleotides

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Probing structural differences between native and in vitro transcribed Escherichia coli valine transfer RNA: evidence for stable base modification-dependent conformers

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Effect of nucleoside modifications on the structure and thermal stability of Escherichia coli valine tRNA.

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Stringent factor from Escherichia coli directs ribosomal binding and release of uncharged tRNA

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A double-filter method for nitrocellulose-filter binding: application to protein-nucleic acid interactions

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Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNALysUUU species

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tRNAdb 2009: compilation of tRNA sequences and tRNA genes

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Affinities of tRNA binding sites of ribosomes from Escherichia coli.

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Near-critical behavior of aminoacyl-tRNA pools in E. coli at rate-limiting supply of amino acids

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Selective charging of tRNA isoacceptors explains patterns of codon usage.

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10.1021/BI1015309

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27 November 2024

Identifiers

DOI

10.1021/BI1015309

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21410133

retrieved

13 September 2017

PubMed publication ID

21410133

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21410133

retrieved

13 September 2017

ResearchGate publication ID

50407753

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