A New Perspective on Microbes Formerly Known as Nitrite-Oxidizing Bacteria. (Q38855546)

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scientific article published on 6 June 2016

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English	A New Perspective on Microbes Formerly Known as Nitrite-Oxidizing Bacteria.	scientific article published on 6 June 2016

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scholarly article

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:27283264%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

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Europe PubMed Central

A New Perspective on Microbes Formerly Known as Nitrite-Oxidizing Bacteria (English)

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13 March 2020

3

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13 March 2020

1

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13 March 2020

Sebastian Lücker

2

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13 March 2020

publication date

6 June 2016

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13 March 2020

Trends in Microbiology

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13 March 2020

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13 March 2020

9

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13 March 2020

699-712

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13 March 2020

Planetary boundaries: Guiding human development on a changing planet

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

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Autotrophic ammonia oxidation at low pH through urea hydrolysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Role for urea in nitrification by polar marine Archaea

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Relative Abundance of Nitrotoga spp. in a Biofilter of a Cold-Freshwater Aquaculture Plant Appears To Be Stimulated by Slightly Acidic pH.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete genome sequence of Nitrobacter hamburgensis X14 and comparative genomic analysis of species within the genus Nitrobacter.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

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Growth of nitrobacter in the presence of organic matter. II. Chemoorganotrophic growth of Nitrobacter agilis

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

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New methods for analysis of spatial distribution and coaggregation of microbial populations in complex biofilms

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

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Factors Affecting the Bacteriostatic Action of Sodium Nitrite

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In situ characterization of Nitrospira-like nitrite-oxidizing bacteria active in wastewater treatment plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NxrB encoding the beta subunit of nitrite oxidoreductase as functional and phylogenetic marker for nitrite-oxidizing Nitrospira.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Genome of Nitrospina gracilis Illuminates the Metabolism and Evolution of the Major Marine Nitrite Oxidizer

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interactions of nitrifying bacteria and heterotrophs: identification of a Micavibrio-like putative predator of Nitrospira spp

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of a new marine nitrite oxidizing bacterium, Nitrospina watsonii sp. nov., a member of the newly proposed phylum "Nitrospinae".

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chromatographic determination of nanomolar cyanate concentrations in estuarine and sea waters by precolumn fluorescence derivatization

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metagenomic analysis of rapid gravity sand filter microbial communities suggests novel physiology of Nitrospira spp.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Look on the positive side! The orientation, identification and bioenergetics of 'Archaeal' membrane-bound nitrate reductases

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metagenomic Evidence for the Presence of Comammox Nitrospira-Like Bacteria in a Drinking Water System.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrotoga-like bacteria are previously unrecognized key nitrite oxidizers in full-scale wastewater treatment plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Formate utilization by Nitrobacter winogradskyi

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Selective enrichment and molecular characterization of a previously uncultured Nitrospira-like bacterium from activated sludge

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expanded metabolic versatility of ubiquitous nitrite-oxidizing bacteria from the genus Nitrospira

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The activated sludge ecosystem contains a core community of abundant organisms

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Temperature influences the population structure of nitrite-oxidizing bacteria in activated sludge

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functionally relevant diversity of closely related Nitrospira in activated sludge.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Diversification and niche adaptations of Nitrospina-like bacteria in the polyextreme interfaces of Red Sea brines.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microscale distribution of populations and activities of Nitrosospira and Nitrospira spp. along a macroscale gradient in a nitrifying bioreactor: quantification by in situ hybridization and the use of microsensors.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation by cyanate of the genes involved in carbon and nitrogen assimilation in the cyanobacterium Synechococcus sp. strain PCC 7942.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete genome sequence of Nitrosospira multiformis, an ammonia-oxidizing bacterium from the soil environment

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microbial nitrogen cycling processes in oxygen minimum zones.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

First exploration of Nitrobacter diversity in soils by a PCR cloning-sequencing approach targeting functional gene nxrA.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Loss of ammonia monooxygenase activity in nitrosomonas europaea upon exposure to nitrite

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genomic and metagenomic surveys of hydrogenase distribution indicate H2 is a widely utilised energy source for microbial growth and survival

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The phylogeny of purple bacteria: the alpha subdivision

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Improved isolation strategies allowed the phenotypic differentiation of two Nitrospira strains from widespread phylogenetic lineages.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Unravelling the reasons for disproportion in the ratio of AOB and NOB in aerobic granular sludge

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The nitrite-oxidizing community in activated sludge from a municipal wastewater treatment plant determined by fatty acid methyl ester-stable isotope probing.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cultivation of a novel cold-adapted nitrite oxidizing betaproteobacterium from the Siberian Arctic.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Competition between Nitrospira spp. and Nitrobacter spp. in nitrite-oxidizing bioreactors.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genomics of a phototrophic nitrite oxidizer: insights into the evolution of photosynthesis and nitrification.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Coupling Between and Among Ammonia Oxidizers and Nitrite Oxidizers in Grassland Mesocosms Submitted to Elevated CO2 and Nitrogen Supply.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Physiological and phylogenetic characterization of a novel lithoautotrophic nitrite-oxidizing bacterium, 'Candidatus Nitrospira bockiana'.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cultivation and characterization of thermophilic Nitrospira species from geothermal springs in the US Great Basin, China, and Armenia

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A generally applicable cryopreservation method for nitrite-oxidizing bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sergei Winogradsky: a founder of modern microbiology and the first microbial ecologist

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and immunocytochemical location of the nitrite-oxidizing system in Nitrospira moscoviensis

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Combined molecular and conventional analyses of nitrifying bacterium diversity in activated sludge: Nitrosococcus mobilis and Nitrospira-like bacteria as dominant populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Whole-genome analysis of the ammonia-oxidizing bacterium, Nitrosomonas eutropha C91: implications for niche adaptation

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete nitrification by Nitrospira bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation of Nitrospira belonging to sublineage II from a wastewater treatment plant

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation of an autotrophic ammonia-oxidizing marine archaeon

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interactions of Nitrosomonas europaea and Nitrobacter winogradskyi grown in co-culture

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrite oxidation in the upper water column and oxygen minimum zone of the eastern tropical North Pacific Ocean

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrite concentration influences the population structure of Nitrospira-like bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fate of 14C-labeled microbial products derived from nitrifying bacteria in autotrophic nitrifying biofilms.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of nitrite concentration on the distribution and competition of nitrite-oxidizing bacteria in nitratation reactor systems and their kinetic characteristics

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome sequence of the chemolithoautotrophic nitrite-oxidizing bacterium Nitrobacter winogradskyi Nb-255.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Environmental pH as an important factor for the distribution of urease positive ammonia-oxidizing bacteria

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrospira community composition in nitrifying reactors operated with two different dissolved oxygen levels.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and characterization of a moderately thermophilic nitrite-oxidizing bacterium from a geothermal spring.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Global nitrogen: cycling out of control

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cyanate as an energy source for nitrifiers

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The phylogeny of the genus Nitrobacter based on comparative rep-PCR, 16S rRNA and nitrite oxidoreductase gene sequence analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In situ analysis of nitrifying biofilms as determined by in situ hybridization and the use of microelectrodes.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single cell genomics: an individual look at microbes

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Insights on the marine microbial nitrogen cycle from isotopic approaches to nitrification

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrite oxidation in the Namibian oxygen minimum zone

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ammonia-oxidizing bacteria: a model for molecular microbial ecology

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrospira-dominated biofilm within a thermal artesian spring: a case for nitrification-driven primary production in a geothermal setting.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hadal biosphere: insight into the microbial ecosystem in the deepest ocean on Earth

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differential contributions of ammonia oxidizers and nitrite oxidizers to nitrification in four paddy soils

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Depletion of unwanted nucleic acid templates by selective cleavage: LNAzymes, catalytically active oligonucleotides containing locked nucleic acids, open a new window for detecting rare microbial community members

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

New insights into the genetic and metabolic diversity of thiocyanate-degrading microbial consortia

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrification expanded: discovery, physiology and genomics of a nitrite-oxidizing bacterium from the phylum Chloroflexi

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrospina-like bacteria are the main drivers of nitrite oxidation in the seasonal upwelling area of the Eastern South Pacific (Central Chile ∼36°S).

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A new obligately chemolithoautotrophic, nitrite-oxidizing bacterium, Nitrospira moscoviensis sp. nov. and its phylogenetic relationship

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression of a putative nitrite reductase and the reversible inhibition of nitrite-dependent respiration by nitric oxide in Nitrobacter winogradskyi Nb-255.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complete nitrification by a single microorganism

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interactions between Thaumarchaea, Nitrospira and methanotrophs modulate autotrophic nitrification in volcanic grassland soil

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Physiologic and proteomic evidence for a role of nitric oxide in biofilm formation by Nitrosomonas europaea and other ammonia oxidizers.

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A decade of metaproteomics: where we stand and what the future holds

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Growth of nitrite-oxidizing bacteria by aerobic hydrogen oxidation

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Why is metabolic labour divided in nitrification?

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single-cell ecophysiology of microbes as revealed by Raman microspectroscopy or secondary ion mass spectrometry imaging

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrite-Oxidizing Bacterium Nitrobacter winogradskyi Produces N-Acyl-Homoserine Lactone Autoinducers

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Nitrite, an Electron Donor for Anoxygenic Photosynthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Comparison of oxidation kinetics of nitrite-oxidizing bacteria: nitrite availability as a key factor in niche differentiation

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pathways and key intermediates required for obligate aerobic ammonia-dependent chemolithotrophy in bacteria and Thaumarchaeota

1 reference

https://pubmed.ncbi.nlm.nih.gov/27283264

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1016/J.TIM.2016.05.004

1 reference

Europe PubMed Central

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13 March 2020

release_aer35xvrrvbc7n2zhh5p6rec5m

1 reference

https://api.fatcat.wiki/v0/release/aer35xvrrvbc7n2zhh5p6rec5m

24 November 2022

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13 March 2020

PubMed publication ID

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Europe PubMed Central

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13 March 2020

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