The Vigna unguiculata Gene Expression Atlas (VuGEA) from de novo assembly and quantification of RNA-seq data provides insights into seed maturation mechanisms. (Q36083576)

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Language	Label	Description	Also known as
English	The Vigna unguiculata Gene Expression Atlas (VuGEA) from de novo assembly and quantification of RNA-seq data provides insights into seed maturation mechanisms.	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

12 August 2017

The Vigna unguiculata Gene Expression Atlas (VuGEA) from de novo assembly and quantification of RNA-seq data provides insights into seed maturation mechanisms. (English)

1 reference

Europe PubMed Central

PubMed publication ID

12 August 2017

author name string

Shaolun Yao

1

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Europe PubMed Central

PubMed publication ID

12 August 2017

Chuan Jiang

2

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Europe PubMed Central

PubMed publication ID

12 August 2017

Ziyue Huang

3

1 reference

Europe PubMed Central

PubMed publication ID

12 August 2017

Ivone Torres-Jerez

4

1 reference

Europe PubMed Central

PubMed publication ID

12 August 2017

Junil Chang

5

1 reference

Europe PubMed Central

PubMed publication ID

12 August 2017

Heng Zhang

6

1 reference

Europe PubMed Central

PubMed publication ID

12 August 2017

Michael Udvardi

7

1 reference

Europe PubMed Central

PubMed publication ID

12 August 2017

Renyi Liu

8

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12 August 2017

Jerome Verdier

9

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12 August 2017

publication date

22 July 2016

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12 August 2017

The Plant Journal

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12 August 2017

88

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Europe PubMed Central

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12 August 2017

2

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Europe PubMed Central

PubMed publication ID

12 August 2017

318-327

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Europe PubMed Central

PubMed publication ID

12 August 2017

Full-length de novo assembly of RNA-seq data in pea (Pisum sativum L.) provides a gene expression atlas and gives insights into root nodulation in this species

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

Identification and comparative analysis of drought-associated microRNAs in two cowpea genotypes.

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

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A gene expression atlas of the model legume Medicago truncatula.

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

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SolexaQA: At-a-glance quality assessment of Illumina second-generation sequencing data

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

psRNATarget: a plant small RNA target analysis server

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

PlantTFcat: an online plant transcription factor and transcriptional regulator categorization and analysis tool

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https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

The grapevine expression atlas reveals a deep transcriptome shift driving the entire plant into a maturation program

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

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Gene discovery and tissue-specific transcriptome analysis in chickpea with massively parallel pyrosequencing and web resource development.

1 reference

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21 January 2018

Full-length transcriptome assembly from RNA-Seq data without a reference genome

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

Legumes: importance and constraints to greater use.

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

The Medicago truncatula gene expression atlas web server

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

Biolistic-mediated genetic transformation of cowpea (Vigna unguiculata) and stable Mendelian inheritance of transgenes.

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

1 reference

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21 January 2018

Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

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Auxin controls seed dormancy through stimulation of abscisic acid signaling by inducing ARF-mediated ABI3 activation in Arabidopsis

1 reference

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21 January 2018

Mercator: a fast and simple web server for genome scale functional annotation of plant sequence data

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

Cutadapt removes adapter sequences from high-throughput sequencing reads

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

A consensus genetic map of cowpea [Vigna unguiculata (L) Walp.] and synteny based on EST-derived SNPs.

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

An RNA-Seq based gene expression atlas of the common bean

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

Genetic transformation of cowpea (Vigna unguiculata L.) and stable transmission of the transgenes to progeny.

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

Transcription factor families in Arabidopsis: major progress and outstanding issues for future research

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

RNA-Seq Atlas of Glycine max: a guide to the soybean transcriptome

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

Genetic approaches to crop improvement: responding to environmental and population changes

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

Sequencing and analysis of the gene-rich space of cowpea

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

Lotus japonicus: legume research in the fast lane

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

PageMan: an interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.).

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

Establishment of theLotus japonicusGene Expression Atlas (LjGEA) and its use to explore legume seed maturation

1 reference

https://api.crossref.org/works/10.1111%2FTPJ.13279

21 January 2018

Identifiers

10.1111/TPJ.13279

1 reference

Europe PubMed Central

PubMed publication ID

12 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

12 August 2017

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