Otx2 ChIP-seq reveals unique and redundant functions in the mature mouse retina (Q35099810)

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English	Otx2 ChIP-seq reveals unique and redundant functions in the mature mouse retina	scientific article

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

Otx2 ChIP-seq reveals unique and redundant functions in the mature mouse retina (English)

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

Thomas Lamonerie

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Thomas Lamonerie

4

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author name string

Alexander Samuel

1

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Europe PubMed Central

PubMed publication ID

6 August 2017

Michael Housset

2

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Europe PubMed Central

PubMed publication ID

6 August 2017

Bruno Fant

3

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Europe PubMed Central

PubMed publication ID

6 August 2017

language of work or name

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publication date

18 February 2014

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Europe PubMed Central

PubMed publication ID

6 August 2017

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Europe PubMed Central

PubMed publication ID

6 August 2017

9

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Europe PubMed Central

PubMed publication ID

6 August 2017

2

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

e89110

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

copyright license

Creative Commons Attribution 4.0 International

18 February 2014

1 reference

April 2022 Public Data File from Crossref

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Chromatin dynamics during cellular reprogramming

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Identification of cis-regulatory modules in promoters of human genes exploiting mutual positioning of transcription factors

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Massively parallel in vivo enhancer assay reveals that highly local features determine the cis-regulatory function of ChIP-seq peaks.

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Loss of Otx2 in the adult retina disrupts retinal pigment epithelium function, causing photoreceptor degeneration

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Regeneration of cone photoreceptors when cell ablation is primarily restricted to a particular cone subtype

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Lens and retina regeneration: new perspectives from model organisms

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Identifying ChIP-seq enrichment using MACS.

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OTX2 and CRX rescue overlapping and photoreceptor-specific functions in the Drosophila eye

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Mutant Prpf31 causes pre-mRNA splicing defects and rod photoreceptor cell degeneration in a zebrafish model for Retinitis pigmentosa.

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CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors

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Otx2 gene deletion in adult mouse retina induces rapid RPE dystrophy and slow photoreceptor degeneration

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In vivo chromatin organization of mouse rod photoreceptors correlates with histone modifications

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Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities

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A 350 bp region of the proximal promoter of Rds drives cell-type specific gene expression

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Genome-wide analysis of POU3F2/BRN2 promoter occupancy in human melanoma cells reveals Kitl as a novel regulated target gene

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G+C content dominates intrinsic nucleosome occupancy

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9 July 2018

Nuclear architecture of rod photoreceptor cells adapts to vision in mammalian evolution.

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Genomic identification of regulatory elements by evolutionary sequence comparison and functional analysis

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9 July 2018

A new GFP-tagged line reveals unexpected Otx2 protein localization in retinal photoreceptors.

1 reference

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9 July 2018

Functional roles of Otx2 transcription factor in postnatal mouse retinal development.

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9 July 2018

Regulation of photoreceptor gene expression by Crx-associated transcription factor network

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9 July 2018

Molecular dissection reveals decreased activity and not dominant negative effect in human OTX2 mutants

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9 July 2018

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes

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9 July 2018

Heterozygous mutations of OTX2 cause severe ocular malformations

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9 July 2018

Sp4 is expressed in retinal neurons, activates transcription of photoreceptor-specific genes, and synergizes with Crx.

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9 July 2018

Otx2 homeobox gene controls retinal photoreceptor cell fate and pineal gland development

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9 July 2018

OTX2 activates the molecular network underlying retina pigment epithelium differentiation

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The evolution of signalling pathways in animal development

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A cis-regulatory element essential for photoreceptor cell-specific expression of a medaka retinal guanylyl cyclase gene.

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Elements regulating the transcription of human interstitial retinoid-binding protein (IRBP) gene in cultured retinoblastoma cells

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Differential transcriptional control as the major molecular event in generating Otx1-/- and Otx2-/- divergent phenotypes

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De novo mutations in the CRX homeobox gene associated with Leber congenital amaurosis

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Cone-rod dystrophy due to mutations in a novel photoreceptor-specific homeobox gene (CRX) essential for maintenance of the photoreceptor

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A short, highly active photoreceptor-specific enhancer/promoter region upstream of the human rhodopsin kinase gene.

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Involvement of Pax6 and Otx2 in the forebrain-specific regulation of the vertebrate homeobox gene ANF/Hesx1.

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Mouse Otx2 functions in the formation and patterning of rostral head.

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Otx2 homeobox gene induces photoreceptor-specific phenotypes in cells derived from adult iris and ciliary tissue

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21 January 2018

Functional equivalency between Otx2 and Otx1 in development of the rostral head

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Goldfish retinotectal system: continuing development and synaptogenesis

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Otx genes are required for tissue specification in the developing eye

1 reference

https://pubmed.ncbi.nlm.nih.gov/24558479

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CEAS: cis-regulatory element annotation system

1 reference

https://pubmed.ncbi.nlm.nih.gov/24558479

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0089110

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

2014PLoSO...989110S

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

ResearchGate publication ID

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