Bacterial microcompartments: their properties and paradoxes (Q33378156)

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scientific article

Language	Label	Description	Also known as
English	Bacterial microcompartments: their properties and paradoxes	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

26 July 2017

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Europe PubMed Central

Bacterial microcompartments: their properties and paradoxes (English)

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Europe PubMed Central

PubMed publication ID

26 July 2017

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Todd O Yeates

4

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author name string

Shouqiang Cheng

1

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Europe PubMed Central

PubMed publication ID

26 July 2017

Yu Liu

2

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Europe PubMed Central

PubMed publication ID

26 July 2017

Christopher S Crowley

3

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Europe PubMed Central

PubMed publication ID

26 July 2017

Thomas A Bobik

5

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Europe PubMed Central

PubMed publication ID

26 July 2017

language of work or name

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publication date

1 November 2008

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Europe PubMed Central

PubMed publication ID

26 July 2017

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Europe PubMed Central

PubMed publication ID

26 July 2017

30

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Europe PubMed Central

PubMed publication ID

26 July 2017

11-12

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

1084-1095

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

Photosynthesis and photorespiration in a mutant of the cyanobacterium Synechocystis PCC 6803 lacking carboxysomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Structure of the PduU shell protein from the Pdu microcompartment of Salmonella

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Biochemical and structural insights into bacterial organelle form and biogenesis.

1 reference

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21 June 2018

Microcompartments for B12-dependent 1,2-propanediol degradation provide protection from DNA and cellular damage by a reactive metabolic intermediate

1 reference

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21 June 2018

Atomic-level models of the bacterial carboxysome shell

1 reference

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21 June 2018

CO2 fixation kinetics of Halothiobacillus neapolitanus mutant carboxysomes lacking carbonic anhydrase suggest the shell acts as a diffusional barrier for CO2.

1 reference

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21 June 2018

A carboxysomal carbon-concentrating mechanism in the cyanelles of the 'coelacanth' of the algal world, Cyanophora paradoxa?

1 reference

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The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features.

1 reference

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21 June 2018

A multiprotein bicarbonate dehydration complex essential to carboxysome function in cyanobacteria

1 reference

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Genomic and biochemical studies demonstrating the absence of an alkane-producing phenotype in Vibrio furnissii M1

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21 June 2018

Analysis of Carboxysomes from Synechococcus PCC7942 Reveals Multiple Rubisco Complexes with Carboxysomal Proteins CcmM and CcaA

1 reference

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21 June 2018

The structure of isolated Synechococcus strain WH8102 carboxysomes as revealed by electron cryotomography

1 reference

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21 June 2018

Advances in understanding the cyanobacterial CO2-concentrating-mechanism (CCM): functional components, Ci transporters, diversity, genetic regulation and prospects for engineering into plants

1 reference

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21 June 2018

Structural analysis of CsoS1A and the protein shell of the Halothiobacillus neapolitanus carboxysome

1 reference

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21 June 2018

Self-assembly in the carboxysome: a viral capsid-like protein shell in bacterial cells.

1 reference

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21 June 2018

Identification of novel genes in genomic islands that contribute to Salmonella typhimurium replication in macrophages

1 reference

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21 June 2018

PduL is an evolutionarily distinct phosphotransacylase involved in B12-dependent 1,2-propanediol degradation by Salmonella enterica serovar typhimurium LT2.

1 reference

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21 June 2018

Structure of Halothiobacillus neapolitanus carboxysomes by cryo-electron tomography

1 reference

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21 June 2018

Expression of Human Carbonic Anhydrase in the Cyanobacterium Synechococcus PCC7942 Creates a High CO(2)-Requiring Phenotype : Evidence for a Central Role for Carboxysomes in the CO(2) Concentrating Mechanism

1 reference

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Despite slow catalysis and confused substrate specificity, all ribulose bisphosphate carboxylases may be nearly perfectly optimized

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Conserving a volatile metabolite: a role for carboxysome-like organelles in Salmonella enterica

1 reference

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21 June 2018

Polyhedral organelles compartmenting bacterial metabolic processes

1 reference

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21 June 2018

The structure of beta-carbonic anhydrase from the carboxysomal shell reveals a distinct subclass with one active site for the price of two

1 reference

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21 June 2018

Intact carboxysomes in a cyanobacterial cell visualized by hilbert differential contrast transmission electron microscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Identification of Listeria monocytogenes genes contributing to intracellular replication by expression profiling and mutant screening

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21 June 2018

Minimal functions and physiological conditions required for growth of salmonella enterica on ethanolamine in the absence of the metabolosome

1 reference

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21 June 2018

Protein Structures Forming the Shell of Primitive Bacterial Organelles

1 reference

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21 June 2018

CO2 concentrating mechanisms in algae: mechanisms, environmental modulation, and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Purification and initial characterization of the Salmonella enterica PduO ATP:Cob(I)alamin adenosyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

A novel evolutionary lineage of carbonic anhydrase (epsilon class) is a component of the carboxysome shell

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

PduP is a coenzyme-a-acylating propionaldehyde dehydrogenase associated with the polyhedral bodies involved in B 12 -dependent 1,2-propanediol degradation by Salmonella enterica serovar Typhimurium LT2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Physical Principles in the Construction of Regular Viruses

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21 June 2018

Cytology of Cyanophycea. II. Centroplasm and granular inclusions of Phormidium uncinatum

1 reference

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21 June 2018

Protein content of polyhedral organelles involved in coenzyme B12-dependent degradation of 1,2-propanediol in Salmonella enterica serovar Typhimurium LT2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Global regulation by CsrA in Salmonella typhimurium

1 reference

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21 June 2018

Propionyl Coenzyme A Is a Common Intermediate in the 1,2-Propanediol and Propionate Catabolic Pathways Needed for Expression of the prpBCDE Operon during Growth of Salmonella enterica on 1,2-Propanediol

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Comparison of the genome sequences of Listeria monocytogenes and Listeria innocua: clues for evolution and pathogenicity

1 reference

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21 June 2018

Carbon sequestration in Synechococcus Sp.: from molecular machines to hierarchical modeling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

CO2 concentrating mechanisms in cyanobacteria: molecular components, their diversity and evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

PduA is a shell protein of polyhedral organelles involved in coenzyme B(12)-dependent degradation of 1,2-propanediol in Salmonella enterica serovar typhimurium LT2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Microcompartments in prokaryotes: carboxysomes and related polyhedra

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

The alternative electron acceptor tetrathionate supports B12-dependent anaerobic growth of Salmonella enterica serovar typhimurium on ethanolamine or 1,2-propanediol

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Functional genomic, biochemical, and genetic characterization of the Salmonella pduO gene, an ATP:cob(I)alamin adenosyltransferase gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

The propanediol utilization (pdu) operon of Salmonella enterica serovar Typhimurium LT2 includes genes necessary for formation of polyhedral organelles involved in coenzyme B(12)-dependent 1, 2-propanediol degradation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Salmonella typhimurium LT2 catabolizes propionate via the 2-methylcitric acid cycle

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

The 17-gene ethanolamine (eut) operon of Salmonella typhimurium encodes five homologues of carboxysome shell proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Coordinate intracellular expression of Salmonella genes induced during infection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

SOMETHING FROM ALMOST NOTHING: Carbon Dioxide Fixation in Chemoautotrophs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Differential patterns of acquired virulence genes distinguish Salmonella strains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Characterization, Sequencing, and Expression of the Genes Encoding a Reactivating Factor for Glycerol-inactivated Adenosylcobalamin-dependent Diol Dehydratase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Propanediol utilization genes (pdu) of Salmonella typhimurium: three genes for the propanediol dehydratase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Quasi-equivalent viruses: a paradigm for protein assemblies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

DNA polymerase I function is required for the utilization of ethanolamine, 1,2-propanediol, and propionate by Salmonella typhimurium LT2

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Two global regulatory systems (Crp and Arc) control the cobalamin/propanediol regulon of Salmonella typhimurium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

The control region of the pdu/cob regulon in Salmonella typhimurium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Isolation and characterization of a carboxysome shell gene from Thiobacillus neapolitanus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Ethanolamine utilization in Salmonella typhimurium: nucleotide sequence, protein expression, and mutational analysis of the cchA cchB eutE eutJ eutG eutH gene cluster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Glutathione is required for maximal transcription of the cobalamin biosynthetic and 1,2-propanediol utilization (cob/pdu) regulon and for the catabolism of ethanolamine, 1,2-propanediol, and propionate in Salmonella typhimurium LT2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Functional organelles in prokaryotes: polyhedral inclusions (carboxysomes) of Thiobacillus neapolitanus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Anaerobic metabolism of the L-rhamnose fermentation product 1,2-propanediol in Salmonella typhimurium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Ethanolamine utilization in Salmonella typhimurium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Redox regulation of the genes for cobinamide biosynthesis in Salmonella typhimurium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

The 5'-flanking region of the gene encoding the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase is crucial for growth of the cyanobacterium Synechococcus sp. strain PCC 7942 at the level of CO2 in air.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Cobalamin-dependent 1,2-propanediol utilization by Salmonella typhimurium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

A gene homologous to chloroplast carbonic anhydrase (icfA) is essential to photosynthetic carbon dioxide fixation by Synechococcus PCC7942

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

The poc locus is required for 1,2-propanediol-dependent transcription of the cobalamin biosynthetic (cob) and propanediol utilization (pdu) genes of Salmonella typhimurium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

A single regulatory gene integrates control of vitamin B12 synthesis and propanediol degradation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Evidence for the B12-dependent enzyme ethanolamine deaminase in Salmonella

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Fermentation of 1,2-Propanediol and 1,2-Ethanediol by Some Genera of Enterobacteriaceae , Involving Coenzyme B 12 -Dependent Diol Dehydratase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Evolution of propanediol utilization in Escherichia coli: mutant with improved substrate-scavenging power

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

21 June 2018

Transcript analysis of the Halothiobacillus neapolitanus cso operon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

31 October 2018

High CO(2) Requiring Mutant of Anacystis nidulans R(2).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

31 October 2018

Isolation of a Putative Carboxysomal Carbonic Anhydrase Gene from the Cyanobacterium Synechococcus PCC7942.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

31 October 2018

Use of Electroporation To Generate a Thiobacillus neapolitanus Carboxysome Mutant

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

31 October 2018

Biochemical evidence that the pduS gene encodes a bifunctional cobalamin reductase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3272490

31 October 2018

CO2 CONCENTRATING MECHANISMS IN PHOTOSYNTHETIC MICROORGANISMS

1 reference

https://pubmed.ncbi.nlm.nih.gov/18937343

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of a mutant lacking carboxysomal carbonic anhydrase from the cyanobacterium Synechocystis PCC6803

1 reference

https://pubmed.ncbi.nlm.nih.gov/18937343

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative evaluation of the role of a putative CO2-scavenging entity in the cyanobacterial CO2-concentrating mechanism

1 reference

https://pubmed.ncbi.nlm.nih.gov/18937343

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A Protein Factor Is Essential forin SituReactivation of Glycerol-inactivated Adenosylcobalamin-dependent Diol Dehydratase

1 reference

https://pubmed.ncbi.nlm.nih.gov/18937343

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Isolation and Characterization of High CO(2)-Requiring-Mutants of the Cyanobacterium Synechococcus PCC7942 : Two Phenotypes that Accumulate Inorganic Carbon but Are Apparently Unable to Generate CO(2) within the Carboxysome

1 reference

https://pubmed.ncbi.nlm.nih.gov/18937343

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

[Characterization of a phage-like particle from cells of Nitrobacter. II. Structure and size (author's transl)]

1 reference

https://pubmed.ncbi.nlm.nih.gov/18937343

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mechanism of reactivation of coenzyme B12-dependent diol dehydratase by a molecular chaperone-like reactivating factor

1 reference

https://pubmed.ncbi.nlm.nih.gov/18937343

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The correlation of the gene csoS2 of the carboxysome operon with two polypeptides of the carboxysome in thiobacillus neapolitanus

1 reference

https://pubmed.ncbi.nlm.nih.gov/18937343

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/BIES.20830

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

26 July 2017

ResearchGate publication ID

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