High-resolution genome-wide mapping of transposon integration in mammals (Q28769896)

2 July 2017

title

High-resolution genome-wide mapping of transposon integration in mammals (English)

1 reference

2 July 2017

0 references

Stephen R Yant

1 reference

2 July 2017

Xiaolin Wu

1 reference

2 July 2017

Yong Huang

1 reference

2 July 2017

Brian Garrison

1 reference

2 July 2017

Shawn M Burgess

1 reference

2 July 2017

Mark A Kay

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2 July 2017

language of work or name

English

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publication date

1 March 2005

1 reference

Molecular and Cellular Biology

2 July 2017

published in

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2 July 2017

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2 July 2017

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2 July 2017

page(s)

2085-2094

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Enhancer trapping in zebrafish using the Sleeping Beauty transposon

2 July 2017

cites work

1 reference

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Retroviral DNA integration: ASLV, HIV, and MLV show distinct target site preferences

16 March 2017

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Microsatellites: simple sequences with complex evolution

16 March 2017

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A gene atlas of the mouse and human protein-encoding transcriptomes

16 March 2017

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Transposable elements for transgenesis and insertional mutagenesis in vertebrates: a contemporary review of experimental strategies

16 March 2017

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Patterns of selection against transposons inferred from the distribution of Tc1, Tc3 and Tc5 insertions in the mut-7 line of the nematode Caenorhabditis elegans

16 March 2017

1 reference

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LMO2-associated clonal T cell proliferation in two patients after gene therapy for SCID-X1

16 March 2017

1 reference

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Regulated transposition of a fish transposon in the mouse germ line

16 March 2017

1 reference

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Transcription start regions in the human genome are favored targets for MLV integration

16 March 2017

1 reference

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HIV-1 integration in the human genome favors active genes and local hotspots

7 April 2017

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Molecular reconstruction of Sleeping Beauty, a Tc1-like transposon from fish, and its transposition in human cells

7 April 2017

1 reference

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Large-scale molecular characterization of adeno-associated virus vector integration in mouse liver

7 April 2017

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Genome-wide analyses of avian sarcoma virus integration sites

20 June 2018

1 reference

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Integration and long-term expression in xenografted human glioblastoma cells using a plasmid-based transposon system

20 June 2018

1 reference

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Endothelial targeting of the Sleeping Beauty transposon within lung

20 June 2018

1 reference

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Transposon-based RNAi delivery system for generating knockdown cell lines

20 June 2018

1 reference

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Sleeping beauty transposition: biology and applications for molecular therapy

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Characterization of Sleeping Beauty transposition and its application to genetic screening in mice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

The Sleeping Beauty transposable element: evolution, regulation and genetic applications

20 June 2018

1 reference

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Nonhomologous-End-Joining Factors Regulate DNA Repair Fidelity during Sleeping Beauty Element Transposition in Mammalian Cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Targeting survival: integration site selection by retroviruses and LTR-retrotransposons

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Transposon Mutagenesis of the Mouse Germline

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Sustainable correction of junctional epidermolysis bullosa via transposon-mediated nonviral gene transfer

20 June 2018

1 reference

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AAV serotype 2 vectors preferentially integrate into active genes in mice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

20 June 2018

Integration by design

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Controlling integration specificity of a yeast retrotransposon

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

The DNA-bending protein HMGB1 is a cellular cofactor of Sleeping Beauty transposition

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Involvement of a bifunctional, paired-like DNA-binding domain and a transpositional enhancer in Sleeping Beauty transposition

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Mammalian germ-line transgenesis by transposition.

20 June 2018

1 reference

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Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length variation, transposon associations, and genetic marker potential

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Efficient chromosomal transposition of a Tc1/mariner- like transposon Sleeping Beauty in mice.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Extrachromosomal recombinant adeno-associated virus vector genomes are primarily responsible for stable liver transduction in vivo

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Transposition and gene disruption in the male germline of the mouse

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Sleeping Beauty, a wide host-range transposon vector for genetic transformation in vertebrates

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Relationship between retroviral DNA integration and gene expression

20 June 2018

1 reference

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Somatic integration and long-term transgene expression in normal and haemophilic mice using a DNA transposon system

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Resident aliens: the Tc1/mariner superfamily of transposable elements

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Chromosomal transposition of a Tc1/mariner-like element in mouse embryonic stem cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Modern thoughts on an ancyent marinere: function, evolution, regulation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Transposon Tc1-derived, sequence-tagged sites in Caenorhabditis elegans as markers for gene mapping

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

A purified mariner transposase is sufficient to mediate transposition in vitro

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Transposase is the only nematode protein required for in vitro transposition of Tc1.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Preferential transposition of Drosophila P elements to nearby chromosomal sites

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Human immunodeficiency virus integrase directs integration to sites of severe DNA distortion within the nucleosome core

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Tethering human immunodeficiency virus 1 integrase to a DNA site directs integration to nearby sequences

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Horizontal transmission, vertical inactivation, and stochastic loss of mariner-like transposable elements

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Gene disruptions using P transposable elements: an integral component of the Drosophila genome project

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Nucleosomes, DNA-binding proteins, and DNA sequence modulate retroviral integration target site selection

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Target-site preferences of Sleeping Beauty transposons.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Insulin expression in livers of diabetic mice mediated by hydrodynamics-based administration

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Healing the wounds inflicted by sleeping beauty transposition by double-strand break repair in mammalian somatic cells.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Transposon-mediated enhancer trapping in medaka

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Efficient gene delivery and gene expression in zebrafish using the Sleeping Beauty transposon.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Helper-Independent Sleeping Beauty transposon-transposase vectors for efficient nonviral gene delivery and persistent gene expression in vivo

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Gene insertion and long-term expression in lung mediated by the Sleeping Beauty transposon system

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

In vivo correction of murine tyrosinemia type I by DNA-mediated transposition.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Common physical properties of DNA affecting target site selection of sleeping beauty and other Tc1/mariner transposable elements.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Transposition from a gutless adeno-transposon vector stabilizes transgene expression in vivo

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Chromosomal effects of adeno-associated virus vector integration

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1061620

Transposon vectors for gene-trap insertional mutagenesis in vertebrates

26 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15743807

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The influence of DNA and nucleosome structure on integration events directed by HIV integrase

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15743807

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/MCB.25.6.2085-2094.2005

1 reference

OpenCitations bibliographic resource ID

2 July 2017

3032870

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3032870

1 reference