A biochemical approach to study the role of the terminal oxidases in aerobic respiration in Shewanella oneidensis MR-1 (Q28539021)

From Wikidata

Jump to navigation Jump to search

The printable version is no longer supported and may have rendering errors. Please update your browser bookmarks and please use the default browser print function instead.

scientific article (publication date: 2014)

Language	Label	Description	Also known as
English	A biochemical approach to study the role of the terminal oxidases in aerobic respiration in Shewanella oneidensis MR-1	scientific article (publication date: 2014)

Statements

scholarly article

0 references

A biochemical approach to study the role of the terminal oxidases in aerobic respiration in Shewanella oneidensis MR-1 (English)

0 references

Shewanella oneidensis

object named as

Shewanella oneidensis

1 reference

based on heuristic

inferred from title

author name string

Sébastien Le Laz

1

0 references

Arlette Kpebe

2

0 references

Marielle Bauzan

3

0 references

Sabrina Lignon

4

0 references

Marc Rousset

5

0 references

Myriam Brugna

6

0 references

language of work or name

0 references

publication date

2014

0 references

0 references

9

0 references

1

0 references

e86343

0 references

copyright license

Creative Commons Attribution 4.0 International

22 January 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

19 March 2017

The structure of cbb3 cytochrome oxidase provides insights into proton pumping

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

19 March 2017

Time-resolved electrometric and optical studies on cytochrome bd suggest a mechanism of electron-proton coupling in the di-heme active site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

19 March 2017

Genome sequence of the dissimilatory metal ion–reducing bacterium Shewanella oneidensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

19 March 2017

Yeast Cox11, a protein essential for cytochrome c oxidase assembly, is a Cu(I)-binding protein.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

19 March 2017

Yeast Sco1, a protein essential for cytochrome c oxidase function is a Cu(I)-binding protein.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

19 March 2017

Cox11p is required for stable formation of the Cu(B) and magnesium centers of cytochrome c oxidase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

19 March 2017

Correlation between protein and mRNA abundance in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

19 March 2017

Structure at 2.7 Å resolution of the Paracoccus denitrificans two-subunit cytochrome c oxidase complexed with an antibody F V fragment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

19 March 2017

The superfamily of heme-copper respiratory oxidases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

19 March 2017

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

19 March 2017

Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

19 March 2017

Transcriptomic and proteomic characterization of the Fur modulon in the metal-reducing bacterium Shewanella oneidensis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

7 April 2017

Analysis of molecular masses and oligomeric states of protein complexes by blue native electrophoresis and isolation of membrane protein complexes by two-dimensional native electrophoresis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

7 April 2017

TopPred II: an improved software for membrane protein structure predictions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

7 April 2017

Blue native electrophoresis for isolation of membrane protein complexes in enzymatically active form

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

7 April 2017

The Escherichia coli CydX protein is a member of the CydAB cytochrome bd oxidase complex and is required for cytochrome bd oxidase activity.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Combined effect of loss of the caa3 oxidase and Crp regulation drives Shewanella to thrive in redox-stratified environments.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Shallow breathing: bacterial life at low O(2).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Bacterial adaptation of respiration from oxic to microoxic and anoxic conditions: redox control

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Aerobic respiratory chain of Escherichia coli is not allowed to work in fully uncoupled mode

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Role of Surf1 in heme recruitment for bacterial COX biogenesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Cytochrome bd oxidase and nitric oxide: from reaction mechanisms to bacterial physiology.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

The cytochrome bd respiratory oxygen reductases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

The diheme cytochrome c(4) from Vibrio cholerae is a natural electron donor to the respiratory cbb(3) oxygen reductase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

The fully oxidized form of the cytochrome bd quinol oxidase from E. coli does not participate in the catalytic cycle: direct evidence from rapid kinetics studies.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Correlation of mRNA expression and protein abundance affected by multiple sequence features related to translational efficiency in Desulfovibrio vulgaris: a quantitative analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Extracellular respiration of dimethyl sulfoxide by Shewanella oneidensis strain MR-1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Involvement of SenC in assembly of cytochrome c oxidase in Rhodobacter capsulatus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Cytochrome c maturation and the physiological role of c-type cytochromes in Vibrio cholerae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Oxygenated complex of cytochrome bd from Escherichia coli: stability and photolability.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

The bacterial cytochrome cbb3 oxidases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

A novel scenario for the evolution of haem-copper oxygen reductases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Redundancy of aerobic respiratory chains in bacteria? Routes, reasons and regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Bacterial respiration: a flexible process for a changing environment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Cytochrome bd biosynthesis in Bacillus subtilis: characterization of the cydABCD operon.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Molecular genetics of the genus Paracoccus: metabolically versatile bacteria with bioenergetic flexibility

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Oxygen regulation of the ccoN gene encoding a component of the cbb3 oxidase in Rhodobacter sphaeroides 2.4.1T: involvement of the FnrL protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Construction and characterization of a mutant of alkaliphilic Bacillus firmus OF4 with a disrupted cta operon and purification of a novel cytochrome bd

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

A high-affinity cbb3-type cytochrome oxidase terminates the symbiosis-specific respiratory chain of Bradyrhizobium japonicum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Effect of microaerophilic cell growth conditions on expression of the aerobic (cyoABCDE and cydAB) and anaerobic (narGHJI, frdABCD, and dmsABC) respiratory pathway genes in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

The cydD gene product, component of a heterodimeric ABC transporter, is required for assembly of periplasmic cytochrome c and of cytochrome bd in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Structure at 2.8 Å resolution of cytochrome c oxidase from Paracoccus denitrificans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Identification of the cydC locus required for expression of the functional form of the cytochrome d terminal oxidase complex in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Regulation of expression of the cytochrome d terminal oxidase in Escherichia coli is transcriptional

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

29 September 2017

Regulation and Function of Versatile Aerobic and Anaerobic Respiratory Metabolism in Pseudomonas aeruginosa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

3 June 2018

Cytochrome bd terminal oxidase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

3 June 2018

Cytochrome bd-type quinol oxidase in a mutant of Bacillus stearothermophilus deficient in caa3-type cytochrome c oxidase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

3 June 2018

The 650 nm Chromophore in Escherichia coli is an 'Oxy-' or Oxygenated Compound, Not the Oxidized Form of Cytochrome Oxidase d: An Hypothesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

3 June 2018

Bacillus subtilis expresses two kinds of haem-A-containing terminal oxidases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

3 June 2018

Cytochrome oxidase genes from Thermus thermophilus. Nucleotide sequence and analysis of the deduced primary structure of subunit IIc of cytochrome caa3.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

3 June 2018

A wide-host-range suicide vector for improving reverse genetics in Gram-negative bacteria: inactivation of the blaA gene of Yersinia enterocolitica

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

3 June 2018

The multiple evolutionary histories of dioxygen reductases: Implications for the origin and evolution of aerobic respiration

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

Cytochrome bd oxidase from Escherichia coli displays high catalase activity: an additional defense against oxidative stress.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

Interaction of the bacterial terminal oxidase cytochrome bd with nitric oxide.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

Redox control of fast ligand dissociation from Escherichia coli cytochrome bd.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

Cytochrome bd from Azotobacter vinelandii: evidence for high-affinity oxygen binding.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

Reduction kinetics of Fe(III), Co(III), U(VI), Cr(VI), and Tc(VII) in cultures of dissimilatory metal-reducing bacteria

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

H₂-dependent azoreduction by Shewanella oneidensis MR-1: involvement of secreted flavins and both [Ni-Fe] and [Fe-Fe] hydrogenases

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

The roles of CymA in support of the respiratory flexibility of Shewanella oneidensis MR-1.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

New insights into the respiratory chains of the chemolithoautotrophic and hyperthermophilic bacterium Aquifex aeolicus

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

The Bradyrhizobium japonicum fixGHIS genes are required for the formation of the high-affinity cbb3-type cytochrome oxidase

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

Multi-step assembly pathway of the cbb3-type cytochrome c oxidase complex

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

Cytochrome bd biosynthesis in Escherichia coli: the sequences of the cydC and cydD genes suggest that they encode the components of an ABC membrane transporter

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

ThecydDgene product, component of a heterodimeric ABC transporter, is required for assembly of periplasmic cytochromecand of cytochromebdinEscherichia coli

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

Direct correlationship between proton translocation and growth yield: an analysis of the respiratory chain of Bacillus stearothermophilus

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

Cloning, sequencing, and mutagenesis of the cytochrome c4 gene from Azotobacter vinelandii: characterization of the mutant strain and a proposed new branch in the respiratory chain

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0086343

21 January 2018

Differential expression of multiple terminal oxidases for aerobic respiration in Pseudomonas aeruginosa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

27 November 2018

Investigation of the role of the cydD gene product in production of a functional cytochrome d oxidase in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3899249

27 November 2018

Correlation between mRNA and protein abundance in Desulfovibrio vulgaris: a multiple regression to identify sources of variations

1 reference

https://pubmed.ncbi.nlm.nih.gov/24466040

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Roles of the ccoGHIS gene products in the biogenesis of the cbb(3)-type cytochrome c oxidase

1 reference

https://pubmed.ncbi.nlm.nih.gov/24466040

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crp-dependent cytochrome bd oxidase confers nitrite resistance to Shewanella oneidensis

1 reference

https://pubmed.ncbi.nlm.nih.gov/24466040

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The haem–copper oxygen reductase of Desulfovibrio vulgaris contains a dihaem cytochrome c in subunit II

1 reference

https://pubmed.ncbi.nlm.nih.gov/24466040

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Yeast SCO1 protein is required for a post-translational step in the accumulation of mitochondrial cytochrome c oxidase subunits I and II

1 reference

https://pubmed.ncbi.nlm.nih.gov/24466040

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Properties of the two terminal oxidases of Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/24466040

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Oxygen reduction in the strict anaerobe Desulfovibrio vulgaris Hildenborough: characterization of two membrane-bound oxygen reductases

1 reference

https://pubmed.ncbi.nlm.nih.gov/24466040

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0086343

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2014PLoSO...986343L

0 references

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PMC publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

PubMed publication ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q28539021&oldid=1862982622"