Control of chromatin structure by spt6: different consequences in coding and regulatory regions (Q27937813)

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scientific article published on November 22, 2010

Language	Label	Description	Also known as
English	Control of chromatin structure by spt6: different consequences in coding and regulatory regions	scientific article published on November 22, 2010

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scholarly article

1 reference

PubMed publication ID

1 December 2016

Control of chromatin structure by spt6: different consequences in coding and regulatory regions (English)

1 reference

PubMed publication ID

1 December 2016

0 references

Chromatin-remodeling histone chaperone SPT6 YGR116W

1 reference

GOA release 2020-03-11

author name string

Iva Ivanovska

1

0 references

Pierre-Étienne Jacques

2

0 references

François Robert

4

0 references

Fred Winston

5

0 references

Oliver J. Rando

3

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21098123

1 September 2024

language of work or name

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publication date

February 2011

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22 November 2010

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21098123

1 September 2024

full work available at URL

https://mcb.asm.org/content/mcb/31/3/531.full.pdf

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21098123

1 September 2024

http://mcb.asm.org/cgi/content/abstract/31/3/531

online access status

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21098123

1 September 2024

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21098123/?tool=EBI

online access status

content deliverer

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21098123

1 September 2024

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21098123/pdf/?tool=EBI

Portable Document Format

online access status

content deliverer

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21098123

1 September 2024

https://europepmc.org/articles/PMC3028613

online access status

content deliverer

Europe PubMed Central

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21098123

1 September 2024

https://europepmc.org/articles/PMC3028613?pdf=render

Portable Document Format

online access status

content deliverer

Europe PubMed Central

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21098123

1 September 2024

https://doi.org/10.1128/mcb.01068-10

online access status

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A21098123

1 September 2024

Molecular and Cellular Biology

1 reference

PubMed publication ID

1 December 2016

31

0 references

3

0 references

531-41

0 references

Uniform transitions of the general RNA polymerase II transcription complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Structure and in vivo requirement of the yeast Spt6 SH2 domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

The Iws1:Spt6:CTD complex controls cotranscriptional mRNA biosynthesis and HYPB/Setd2-mediated histone H3K36 methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

A genetic screen in Saccharomyces cerevisiae identifies new genes that interact with mex67-5, a temperature-sensitive allele of the gene encoding the mRNA export receptor.

1 reference

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20 March 2017

Roles for Ctk1 and Spt6 in regulating the different methylation states of histone H3 lysine 36.

1 reference

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20 March 2017

Crystal Structure and RNA Binding of the Tex Protein from Pseudomonas aeruginosa

1 reference

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20 March 2017

Spn1 regulates the recruitment of Spt6 and the Swi/Snf complex during transcriptional activation by RNA polymerase II

1 reference

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20 March 2017

Regulation of histone modification and cryptic transcription by the Bur1 and Paf1 complexes

1 reference

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20 March 2017

Genome-wide replication-independent histone H3 exchange occurs predominantly at promoters and implicates H3 K56 acetylation and Asf1.

1 reference

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20 March 2017

Transcription through chromatin by RNA polymerase II: histone displacement and exchange

1 reference

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20 March 2017

The Spt6 SH2 domain binds Ser2-P RNAPII to direct Iws1-dependent mRNA splicing and export

1 reference

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20 March 2017

Asf1 mediates histone eviction and deposition during elongation by RNA polymerase II.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Transcriptional activators are dispensable for transcription in the absence of Spt6-mediated chromatin reassembly of promoter regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Evidence that Spt2/Sin1, an HMG-like factor, plays roles in transcription elongation, chromatin structure, and genome stability in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Histone H3 methylation by Set2 directs deacetylation of coding regions by Rpd3S to suppress spurious intragenic transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Identification and characterization of Elf1, a conserved transcription elongation factor in Saccharomyces cerevisiae

1 reference

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20 March 2017

Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning

1 reference

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20 March 2017

Interaction between transcription elongation factors and mRNA 3'-end formation at the Saccharomyces cerevisiae GAL10-GAL7 locus.

1 reference

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20 March 2017

Intergenic transcription is required to repress the Saccharomyces cerevisiae SER3 gene

1 reference

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20 March 2017

Human Spt6 stimulates transcription elongation by RNA polymerase II in vitro

1 reference

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20 March 2017

Transcription elongation factors repress transcription initiation from cryptic sites.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Development and validation of a T7 based linear amplification for genomic DNA

1 reference

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20 March 2017

Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach

1 reference

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20 March 2017

Functional profiling of the Saccharomyces cerevisiae genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Functional interaction between pleiotropic transactivator pUL69 of human cytomegalovirus and the human homolog of yeast chromatin regulatory protein SPT6

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Evidence that Spt4, Spt5, and Spt6 control transcription elongation by RNA polymerase II in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Cha4p of Saccharomyces cerevisiae activates transcription via serine/threonine response elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Evidence that Spt6p controls chromatin structure by a direct interaction with histones

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Construction of a set of convenient Saccharomyces cerevisiae strains that are isogenic to S288C

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Chromatin- and transcription-related factors repress transcription from within coding regions throughout the Saccharomyces cerevisiae genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

20 March 2017

Genome-wide map of nucleosome acetylation and methylation in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

7 April 2017

Transitions in RNA polymerase II elongation complexes at the 3' ends of genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

7 April 2017

Histones: annotating chromatin

1 reference

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7 April 2017

The biology of chromatin remodeling complexes

1 reference

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7 April 2017

RNA polymerase complexes cooperate to relieve the nucleosomal barrier and evict histones

1 reference

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29 September 2017

Deletion of Candida albicans SPT6 is not lethal but results in defective hyphal growth

1 reference

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29 September 2017

Mechanism of chromatin remodeling and recovery during passage of RNA polymerase II.

1 reference

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29 September 2017

The Set2/Rpd3S pathway suppresses cryptic transcription without regard to gene length or transcription frequency

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

29 September 2017

Spt6 enhances the elongation rate of RNA polymerase II in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

29 September 2017

Evidence for gene-specific rather than transcription rate-dependent histone H3 exchange in yeast coding regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3028613

29 September 2017

Histone chaperones: 30 years from isolation to elucidation of the mechanisms of nucleosome assembly and disassembly

1 reference

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29 September 2017

A high-resolution atlas of nucleosome occupancy in yeast

1 reference

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29 September 2017

Negotiating the nucleosome: factors that allow RNA polymerase II to elongate through chromatin

1 reference

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29 September 2017

The role of the SPT6 chromatin remodeling factor in zebrafish embryogenesis

1 reference

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29 September 2017

H2A.Z-mediated localization of genes at the nuclear periphery confers epigenetic memory of previous transcriptional state

1 reference

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29 September 2017

Chromatin structure in the genomics era.

1 reference

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29 September 2017

Histone dynamics during transcription: exchange of H2A/H2B dimers and H3/H4 tetramers during pol II elongation.

1 reference

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Genome-scale identification of nucleosome positions in S. cerevisiae

1 reference

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Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II.

1 reference

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1 reference

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29 September 2017

Evidence for distinct mechanisms facilitating transcript elongation through chromatin in vivo

1 reference

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29 September 2017

Facts about FACT and transcript elongation through chromatin

1 reference

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29 September 2017

Global and specific transcriptional repression by the histone H3 amino terminus in yeast

1 reference

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29 September 2017

Defects in SPT16 or POB3 (yFACT) in Saccharomyces cerevisiae cause dependence on the Hir/Hpc pathway: polymerase passage may degrade chromatin structure.

1 reference

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The RNA processing exosome is linked to elongating RNA polymerase II in Drosophila

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The elongation factors Pandora/Spt6 and Foggy/Spt5 promote transcription in the zebrafish embryo

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1 reference

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29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

SSN20 is an essential gene with mutant alleles that suppress defects in SUC2 transcription in Saccharomyces cerevisiae

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29 September 2017

The SPT6 gene is essential for growth and is required for delta-mediated transcription in Saccharomyces cerevisiae

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Requirements for chromatin reassembly during transcriptional downregulation of a heat shock gene in Saccharomyces cerevisiae

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Development of the proepicardial organ in the zebrafish

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Dynamics of Replication-Independent Histone Turnover in Budding Yeast

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27 November 2018

emb-5, a gene required for the correct timing of gut precursor cell division during gastrulation in Caenorhabditis elegans, encodes a protein similar to the yeast nuclear protein SPT6.

1 reference

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27 November 2018

Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/21098123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Continuous histone H2B and transcription-dependent histone H3 exchange in yeast cells outside of replication

1 reference

https://pubmed.ncbi.nlm.nih.gov/21098123

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/MCB.01068-10

1 reference

PubMed publication ID

1 December 2016

PMC publication ID

0 references

PubMed publication ID

1 reference

PubMed publication ID

1 December 2016

ResearchGate publication ID

0 references

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