Evaluation of paired-end sequencing strategies for detection of genome rearrangements in cancer (Q21145383)

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Language	Label	Description	Also known as
English	Evaluation of paired-end sequencing strategies for detection of genome rearrangements in cancer	scientific article

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scholarly article

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Evaluation of paired-end sequencing strategies for detection of genome rearrangements in cancer (English)

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4

object named as

Vineet Bafna

author given names

Vineet

author last names

Bafna

1 reference

PubMed publication ID

18 August 2022

author name string

Ali Bashir

1

author given names

Ali

author last names

Bashir

1 reference

PubMed publication ID

18 August 2022

Stanislav Volik

2

author given names

Stanislav

author last names

Volik

1 reference

PubMed publication ID

18 August 2022

Colin Collins

3

author given names

Colin

author last names

Collins

1 reference

PubMed publication ID

18 August 2022

Benjamin J Raphael

5

author given names

Benjamin J

author last names

Raphael

1 reference

PubMed publication ID

18 August 2022

language of work or name

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publication date

April 2008

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PLOS Computational Biology

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4

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4

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e1000051

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copyright license

Creative Commons Attribution 4.0 International

25 April 2008

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April 2022 Public Data File from Crossref

copyright status

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Paired-end mapping reveals extensive structural variation in the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

Architectures of somatic genomic rearrangement in human cancer amplicons at sequence-level resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

ChimerDB--a knowledgebase for fusion sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

End-sequence profiling: sequence-based analysis of aberrant genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

The protein kinase complement of the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

Gene ontology: tool for the unification of biology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

Fine-scale structural variation of the human genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

Recurrent fusion of TMPRSS2 and ETS transcription factor genes in prostate cancer.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

Identification of the transforming EML4-ALK fusion gene in non-small-cell lung cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

The UCSC Genome Browser Database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

Fusion of a kinase gene, ALK, to a nucleolar protein gene, NPM, in non-Hodgkin's lymphoma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

Genomic mapping by fingerprinting random clones: a mathematical analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

Fusion transcripts and transcribed retrotransposed loci discovered through comprehensive transcriptome analysis using Paired-End diTags (PETs)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

19 March 2017

A sequence-based survey of the complex structural organization of tumor genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

High resolution oligonucleotide CGH using DNA from archived prostate tissue

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

A novel approach for determining cancer genomic breakpoints in the presence of normal DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

The impact of translocations and gene fusions on cancer causation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

Whole-genome re-sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

Multiplex sequencing of paired-end ditags (MS-PET): a strategy for the ultra-high-throughput analysis of transcriptomes and genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

Proteomic identification of oncogenic chromosomal translocation partners encoding chimeric anaplastic lymphoma kinase fusion proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

Decoding the fine-scale structure of a breast cancer genome and transcriptome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

Array comparative genomic hybridization and its applications in cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

Comparative genomic hybridization using oligonucleotide microarrays and total genomic DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

Cloning of BCAS3 (17q23) and BCAS4 (20q13) genes that undergo amplification, overexpression, and fusion in breast cancer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

STI571 (Gleevec) as a paradigm for cancer therapy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

Ewing sarcoma 11;22 translocation produces a chimeric transcription factor that requires the DNA-binding domain encoded by FLI1 for transformation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

The molecular pathology of chronic myelogenous leukaemia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

A colony bank containing synthetic Col El hybrid plasmids representative of the entire E. coli genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

12 September 2017

Reconstructing tumor amplisomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

27 September 2017

Molecular genetics of human B- and T-cell neoplasia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2278375

30 May 2018

Spliced MLL fusions: a novel mechanism to generate functional chimeric MLL-MLLT1 transcripts in t(11;19)(q23;p13.3) leukemia.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000051

21 January 2018

Reconstructing tumor genome architectures

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000051

21 January 2018

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1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000051

21 January 2018

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1 reference

https://pubmed.ncbi.nlm.nih.gov/18404202

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Downstream signaling mechanism of the C-terminal activation domain of transcriptional coactivator CoCoA.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1000051

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1371/JOURNAL.PCBI.1000051

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DBLP publication ID

journals/ploscb/BashirVCBR08

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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ResearchGate publication ID

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