Genomic variation underlying complex life-history traits revealed by genome sequencing in Chinook salmon (Q90561560)

From Wikidata

Jump to navigation Jump to search

scientific article published on 18 July 2018

edit

Language	Label	Description	Also known as
English	Genomic variation underlying complex life-history traits revealed by genome sequencing in Chinook salmon	scientific article published on 18 July 2018

Statements

instance of

scholarly article

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

title

Genomic variation underlying complex life-history traits revealed by genome sequencing in Chinook salmon (English)

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

main subject

whole genome sequencing

1 reference

based on heuristic

inferred from title

life-history trait

1 reference

based on heuristic

inferred from title

author

Shawn R Narum

series ordinal

1

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

author name string

Alex Di Genova

series ordinal

2

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

Steven J Micheletti

series ordinal

3

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

Alejandro Maass

series ordinal

4

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

publication date

18 July 2018

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

published in

Proceedings of the Royal Society B

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

volume

285

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

issue

1883

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

cites work

Phenotypic diversity and ecosystem functioning in changing environments: a theoretical framework.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

APE: Analyses of Phylogenetics and Evolution in R language

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Life-history divergence in Chinook salmon: historic contingency and parallel evolution

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Strength of Phenotypic Selection in Natural Populations

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differentiating salmon populations at broad and fine geographical scales with microsatellites and single nucleotide polymorphisms

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Population diversity and the portfolio effect in an exploited species

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequencing the genome of the Atlantic salmon (Salmo salar).

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Extent and scale of local adaptation in salmonid fishes: review and meta-analysis

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq)

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The genomic basis of adaptive evolution in threespine sticklebacks

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Earlier migration timing, decreasing phenotypic variation, and biocomplexity in multiple salmonid species

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Endogenous purification reveals GREB1 as a key estrogen receptor regulatory factor

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stacks: an analysis tool set for population genomics

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A dense linkage map for Chinook salmon (Oncorhynchus tshawytscha) reveals variable chromosomal divergence after an ancestral whole genome duplication event.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A well-constrained estimate for the timing of the salmonid whole genome duplication reveals major decoupling from species diversification

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

SAMBLASTER: fast duplicate marking and structural variant read extraction

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequencing pools of individuals — mining genome-wide polymorphism data without big funding

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Whole-body endothermy in a mesopelagic fish, the opah, Lampris guttatus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Abnormal Activation of RhoA/ROCK-I Signaling in Junctional Zone Smooth Muscle Cells of Patients With Adenomyosis.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Environmental adaptation in Chinook salmon (Oncorhynchus tshawytscha) throughout their North American range.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An integrated linkage map reveals candidate genes underlying adaptive variation in Chinook salmon (Oncorhynchus tshawytscha).

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sex-dependent dominance at a single locus maintains variation in age at maturity in salmon

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The vgll3 Locus Controls Age at Maturity in Wild and Domesticated Atlantic Salmon (Salmo salar L.) Males

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural genomic changes underlie alternative reproductive strategies in the ruff (Philomachus pugnax).

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Atlantic salmon genome provides insights into rediploidization

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic basis of adult migration timing in anadromous steelhead discovered through multivariate association testing.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Accuracy of Assignment of Atlantic Salmon (Salmo salar L.) to Rivers and Regions in Scotland and Northeast England Based on Single Nucleotide Polymorphism (SNP) Markers

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

PANTHER version 11: expanded annotation data from Gene Ontology and Reactome pathways, and data analysis tool enhancements

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Accounting for linkage disequilibrium in genome scans for selection without individual genotypes: The local score approach

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Fructose-driven glycolysis supports anoxia resistance in the naked mole-rat.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Congruent population structure across paralogous and nonparalogous loci in Salish Sea chum salmon (Oncorhynchus keta).

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Screening of duplicated loci reveals hidden divergence patterns in a complex salmonid genome

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The evolutionary basis of premature migration in Pacific salmon highlights the utility of genomics for informing conservation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

BUSCO applications from quality assessments to gene prediction and phylogenomics

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chinook salmon (Oncorhynchus tshawytscha) genome and transcriptome.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Utility of pooled sequencing for association mapping in nonmodel organisms.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/30051839

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1098/RSPB.2018.0935

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

PMC publication ID

6083255

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

PubMed publication ID

30051839

1 reference

stated in

Europe PubMed Central

PMC publication ID

6083255

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30051839%20AND%20SRC:MED&resulttype=core&format=json

retrieved

14 April 2020

 

Sitelinks

Wikipedia(0 entries)

edit

Wikibooks(0 entries)

edit

Wikinews(0 entries)

edit

Wikiquote(0 entries)

edit

Wikisource(0 entries)

edit

Wikiversity(0 entries)

edit

Wikivoyage(0 entries)

edit

Wiktionary(0 entries)

edit

Multilingual sites(0 entries)

edit

Retrieved from "https://www.wikidata.org/w/index.php?title=Q90561560&oldid=1685613462"