Electrostatic calculations of the pKa values of ionizable groups in bacteriorhodopsin (Q52423696)

1 May 2018

title

Electrostatic calculations of the pKa values of ionizable groups in bacteriorhodopsin (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1313886

12 September 2022

1 reference

https://api.crossref.org/works/10.1016/0022-2836(92)91009-E

3 December 2023

D. Bashford

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1313886

12 September 2022

K. Gerwert

series ordinal

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A1313886

12 September 2022

language of work or name

English

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publication date

1 March 1992

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1 May 2018

20 March 1992

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National Center for Biotechnology Information

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/esummary.fcgi?db=pubmed&retmode=json&id=1313886

full work available at URL

12 September 2022

https://api.elsevier.com/content/article/PII:002228369291009E?httpAccept=text/xml

1 reference

Crossref

DOI

https://api.crossref.org/works/10.1016/0022-2836(92)91009-E

https://api.elsevier.com/content/article/PII:002228369291009E?httpAccept=text/plain

3 December 2023

1 reference

Crossref

DOI

https://api.crossref.org/works/10.1016/0022-2836(92)91009-E

Journal of Molecular Biology

3 December 2023

published in

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1 May 2018

volume

224

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1 May 2018

issue

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1 May 2018

page(s)

473-486

1 reference

1 May 2018

Electrostatic effects of charge perturbations introduced by metal oxidation in proteins. A theoretical analysis

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pKa's of ionizable groups in proteins: atomic detail from a continuum electrostatic model

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Multiple-site titration curves of proteins: an analysis of exact and approximate methods for their calculation

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Vibrational spectroscopy of bacteriorhodopsin mutants: light-driven proton transport involves protonation changes of aspartic acid residues 85, 96, and 212

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Polar hydrogen positions in proteins: Empirical energy placement and neutron diffraction comparison

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Nuclear magnetic resonance study of the Schiff base in bacteriorhodopsin: counterion effects on the 15N shift anisotropy

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Bacteriorhodopsin monomers pump protons

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On the mechanism of hydrogen-deuterium exchange in bacteriorhodopsin

3 December 2023

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Acid-base equilibrium of the Schiff base in bacteriorhodopsin.

3 December 2023

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Light-driven protonation changes of internal aspartic acids of bacteriorhodopsin: an investigation by static and time-resolved infrared difference spectroscopy using [4-13C]aspartic acid labeled purple membrane

3 December 2023

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Simultaneous monitoring of light-induced changes in protein side-group protonation, chromophore isomerization, and backbone motion of bacteriorhodopsin by time-resolved Fourier-transform infrared spectroscopy

3 December 2023

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Calculation of electrostatic potentials in an enzyme active site

3 December 2023

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The structure of the purple membrane from Halobacterium halobium: Analysis of the X-ray diffraction pattern

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Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy

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Solid-state 13C NMR study of tyrosine protonation in dark-adapted bacteriorhodopsin

3 December 2023

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Replacement of aspartic acid-96 by asparagine in bacteriorhodopsin slows both the decay of the M intermediate and the associated proton movement

3 December 2023

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Photoisomerization, energy storage, and charge separation: A model for light energy transduction in visual pigments and bacteriorhodopsin

3 December 2023

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Experimental evidence for secondary protein-chromophore interactions at the Schiff base linkage in bacteriorhodopsin: Molecular mechanism for proton pumping

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Two pumps, one principle: light-driven ion transport in halobacteria

3 December 2023

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Substitution of amino acids Asp-85, Asp-212, and Arg-82 in bacteriorhodopsin affects the proton release phase of the pump and the pK of the Schiff base

3 December 2023

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Restart procedures for the conjugate gradient method

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Areas, volumes, packing and protein structure

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Prediction of electrostatic effects of engineering of protein charges.

3 December 2023

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Bacteriorhodopsin and Related Pigments of Halobacteria

3 December 2023

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Interpretation of protein titration curves. Application to lysozyme

3 December 2023

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The effect of protonation and electrical interactions on the stereochemistry of retinal schiff bases

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Identifiers

DOI

1 reference

1 May 2018

1 reference

1 May 2018