Systematic survey for novel types of prokaryotic retroelements based on gene neighborhood and protein architecture. (Q52422271)

1 May 2018

title

Systematic survey for novel types of prokaryotic retroelements based on gene neighborhood and protein architecture. (English)

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1 May 2018

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1 May 2018

author name string

Minoru Kanehisa

series ordinal

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1 May 2018

publication date

7 April 2008

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Molecular Biology and Evolution

published in

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volume

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issue

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page(s)

1395-1404

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

cites work

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes

21 January 2018

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A distal enhancer and an ultraconserved exon are derived from a novel retroposon

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

The end of the (DNA) line

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

A systematic analysis of LINE-1 endonuclease-dependent retrotranspositional events causing human genetic disease

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

R2 target-primed reverse transcription: ordered cleavage and polymerization steps by protein subunits asymmetrically bound to the target DNA.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Mobile elements and mammalian genome evolution.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

LINE-mediated retrotransposition of marked Alu sequences

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Tropism switching in Bordetella bacteriophage defines a family of diversity-generating retroelements

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Human LINE retrotransposons generate processed pseudogenes

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

The DIRS1 group of retrotransposons.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Retrons, msDNA, and the bacterial genome

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Initial sequencing and analysis of the human genome

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

A novel mechanism of self-primed reverse transcription defines a new family of retroelements

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

CDD: a curated Entrez database of conserved domain alignments

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Exon shuffling by L1 retrotransposition

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

DNA repair mediated by endonuclease-independent LINE-1 retrotransposition

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Prokaryotic DNA polymerase I: evolution, structure, and "base flipping" mechanism for nucleotide selection

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

DIRS-1 and the other tyrosine recombinase retrotransposons.

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Reverse transcriptase and endonuclease activities encoded by Penelope-like retroelements

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Low-molecular-weight plasmid of Salmonella enterica serovar Enteritidis codes for retron reverse transcriptase and influences phage resistance

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Recruitment of host functions suggests a repair pathway for late steps in group II intron retrohoming

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Transposable elements in mammals promote regulatory variation and diversification of genes with specialized functions

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Fish retroposons related to the Penelope element of Drosophila virilis define a new group of retrotransposable elements

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Phylogenetic relationships among group II intron ORFs

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

Erratum: Retrotransposition of a bacterial group II intron

21 January 2018

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https://api.crossref.org/works/10.1093%2FMOLBEV%2FMSN081

21 January 2018

Identifiers

DOI

10.1093/MOLBEV/MSN081

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1 May 2018

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1 May 2018